Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yjbH and OKFHMN_13150 overlap by 1 nucleotides OKFHMN_13150 and OKFHMN_13155 overlap by 4 nucleotides OKFHMN_13155 and yjbE are separated by 113 nucleotides yjbE and pgi are separated by 512 nucleotides
OKFHMN_13145: yjbH - Uncharacterized lipoprotein YjbH, at 2,520,798 to 2,522,894
yjbH
OKFHMN_13150: OKFHMN_13150 - Uncharacterized protein YjbG, at 2,522,894 to 2,523,631
_13150
OKFHMN_13155: OKFHMN_13155 - Lipoprotein yjbF, at 2,523,628 to 2,524,266
_13155
OKFHMN_13160: yjbE - Uncharacterized protein YjbE, at 2,524,380 to 2,524,622
yjbE
OKFHMN_13175: pgi - glucose-6-phosphate isomerase, at 2,525,135 to 2,526,784
pgi
Position (kb)
2523
2524
2525 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2522.651 kb on - strand, within yjbH at 2522.698 kb on + strand at 2522.776 kb on - strand at 2522.785 kb on - strand at 2522.853 kb on - strand at 2522.853 kb on - strand at 2522.868 kb on + strand at 2522.869 kb on - strand at 2522.874 kb on - strand at 2522.985 kb on + strand, within OKFHMN_13150 at 2522.986 kb on - strand, within OKFHMN_13150 at 2522.986 kb on - strand, within OKFHMN_13150 at 2522.986 kb on - strand, within OKFHMN_13150 at 2522.990 kb on - strand, within OKFHMN_13150 at 2523.011 kb on + strand, within OKFHMN_13150 at 2523.011 kb on + strand, within OKFHMN_13150 at 2523.081 kb on + strand, within OKFHMN_13150 at 2523.082 kb on - strand, within OKFHMN_13150 at 2523.085 kb on + strand, within OKFHMN_13150 at 2523.086 kb on - strand, within OKFHMN_13150 at 2523.123 kb on + strand, within OKFHMN_13150 at 2523.124 kb on - strand, within OKFHMN_13150 at 2523.226 kb on - strand, within OKFHMN_13150 at 2523.226 kb on - strand, within OKFHMN_13150 at 2523.332 kb on + strand, within OKFHMN_13150 at 2523.492 kb on - strand, within OKFHMN_13150 at 2523.616 kb on + strand at 2523.625 kb on + strand at 2523.625 kb on + strand at 2523.859 kb on + strand, within OKFHMN_13155 at 2523.860 kb on - strand, within OKFHMN_13155 at 2524.109 kb on + strand, within OKFHMN_13155 at 2524.110 kb on - strand, within OKFHMN_13155 at 2524.129 kb on - strand, within OKFHMN_13155 at 2524.231 kb on + strand at 2524.231 kb on + strand at 2524.231 kb on + strand at 2524.316 kb on - strand at 2524.328 kb on - strand at 2524.328 kb on - strand at 2524.373 kb on + strand at 2524.373 kb on + strand at 2524.373 kb on + strand at 2524.373 kb on + strand at 2524.378 kb on + strand at 2524.378 kb on + strand at 2524.379 kb on - strand at 2524.388 kb on + strand at 2524.421 kb on + strand, within yjbE at 2524.422 kb on - strand, within yjbE at 2524.551 kb on + strand, within yjbE at 2524.552 kb on - strand, within yjbE at 2524.695 kb on - strand at 2524.965 kb on - strand at 2524.994 kb on + strand at 2524.995 kb on - strand at 2525.012 kb on + strand at 2525.013 kb on - strand at 2525.050 kb on + strand at 2525.089 kb on - strand at 2525.107 kb on - strand at 2525.107 kb on - strand at 2525.107 kb on - strand at 2525.110 kb on + strand at 2525.183 kb on - strand at 2525.227 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 2,522,651 - yjbH OKFHMN_13145 0.88 -1.6 2,522,698 + -0.7 2,522,776 - +0.2 2,522,785 - +0.0 2,522,853 - +0.2 2,522,853 - +0.5 2,522,868 + +0.3 2,522,869 - -0.2 2,522,874 - -1.3 2,522,985 + OKFHMN_13150 0.12 -1.4 2,522,986 - OKFHMN_13150 0.12 -0.0 2,522,986 - OKFHMN_13150 0.12 +0.1 2,522,986 - OKFHMN_13150 0.12 +0.6 2,522,990 - OKFHMN_13150 0.13 -1.6 2,523,011 + OKFHMN_13150 0.16 +0.3 2,523,011 + OKFHMN_13150 0.16 +0.4 2,523,081 + OKFHMN_13150 0.25 +0.9 2,523,082 - OKFHMN_13150 0.25 -0.3 2,523,085 + OKFHMN_13150 0.26 +0.0 2,523,086 - OKFHMN_13150 0.26 +0.4 2,523,123 + OKFHMN_13150 0.31 +0.4 2,523,124 - OKFHMN_13150 0.31 +0.6 2,523,226 - OKFHMN_13150 0.45 +0.3 2,523,226 - OKFHMN_13150 0.45 +0.8 2,523,332 + OKFHMN_13150 0.59 -0.1 2,523,492 - OKFHMN_13150 0.81 -0.5 2,523,616 + -0.0 2,523,625 + -0.4 2,523,625 + -1.0 2,523,859 + OKFHMN_13155 0.36 -0.2 2,523,860 - OKFHMN_13155 0.36 +0.2 2,524,109 + OKFHMN_13155 0.75 +0.4 2,524,110 - OKFHMN_13155 0.75 -0.7 2,524,129 - OKFHMN_13155 0.78 +0.2 2,524,231 + -0.3 2,524,231 + +0.5 2,524,231 + +0.0 2,524,316 - +0.3 2,524,328 - -0.8 2,524,328 - +0.5 2,524,373 + -0.0 2,524,373 + +0.7 2,524,373 + -0.3 2,524,373 + +0.9 2,524,378 + -2.4 2,524,378 + +0.2 2,524,379 - -0.3 2,524,388 + +0.5 2,524,421 + yjbE OKFHMN_13160 0.17 +0.3 2,524,422 - yjbE OKFHMN_13160 0.17 -0.1 2,524,551 + yjbE OKFHMN_13160 0.70 -2.0 2,524,552 - yjbE OKFHMN_13160 0.71 +1.0 2,524,695 - +0.4 2,524,965 - -0.0 2,524,994 + -1.6 2,524,995 - +2.1 2,525,012 + -0.1 2,525,013 - -0.3 2,525,050 + -0.2 2,525,089 - -0.3 2,525,107 - +0.1 2,525,107 - -0.3 2,525,107 - -0.7 2,525,110 + +0.2 2,525,183 - -4.1 2,525,227 + -2.3
Or see this region's nucleotide sequence