Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ulaA and ulaG are separated by 354 nucleotides ulaG and ulaR are separated by 107 nucleotides ulaR and yjfP overlap by 4 nucleotides
OKFHMN_12150: ulaA - PTS ascorbate transporter subunit IIC, at 2,326,422 to 2,327,819
ulaA
OKFHMN_12155: ulaG - L-ascorbate 6-phosphate lactonase, at 2,328,174 to 2,329,238
ulaG
OKFHMN_12160: ulaR - HTH-type transcriptional regulator UlaR, at 2,329,346 to 2,330,101
ulaR
OKFHMN_12165: yjfP - esterase, at 2,330,098 to 2,330,847
yjfP
Position (kb)
2328
2329
2330 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2327.287 kb on + strand, within ulaA at 2327.288 kb on - strand, within ulaA at 2327.288 kb on - strand, within ulaA at 2327.343 kb on - strand, within ulaA at 2327.467 kb on + strand, within ulaA at 2327.467 kb on + strand, within ulaA at 2327.467 kb on + strand, within ulaA at 2327.497 kb on - strand, within ulaA at 2327.516 kb on + strand, within ulaA at 2327.516 kb on + strand, within ulaA at 2327.516 kb on + strand, within ulaA at 2327.517 kb on - strand, within ulaA at 2327.517 kb on - strand, within ulaA at 2327.517 kb on - strand, within ulaA at 2327.518 kb on + strand, within ulaA at 2327.560 kb on + strand, within ulaA at 2327.560 kb on + strand, within ulaA at 2327.674 kb on - strand, within ulaA at 2327.699 kb on + strand at 2327.728 kb on + strand at 2327.729 kb on - strand at 2327.747 kb on + strand at 2327.747 kb on + strand at 2327.806 kb on + strand at 2327.806 kb on + strand at 2327.841 kb on + strand at 2328.165 kb on + strand at 2328.192 kb on - strand at 2328.390 kb on - strand, within ulaG at 2328.461 kb on + strand, within ulaG at 2328.462 kb on - strand, within ulaG at 2328.539 kb on + strand, within ulaG at 2328.540 kb on - strand, within ulaG at 2328.589 kb on + strand, within ulaG at 2328.596 kb on + strand, within ulaG at 2328.679 kb on + strand, within ulaG at 2328.728 kb on + strand, within ulaG at 2328.808 kb on - strand, within ulaG at 2328.808 kb on - strand, within ulaG at 2328.859 kb on - strand, within ulaG at 2328.864 kb on - strand, within ulaG at 2328.868 kb on - strand, within ulaG at 2329.095 kb on + strand, within ulaG at 2329.095 kb on + strand, within ulaG at 2329.237 kb on - strand at 2329.248 kb on + strand at 2329.248 kb on + strand at 2329.249 kb on - strand at 2329.287 kb on - strand at 2329.289 kb on + strand at 2329.468 kb on + strand, within ulaR at 2329.468 kb on + strand, within ulaR at 2329.468 kb on + strand, within ulaR at 2329.519 kb on + strand, within ulaR at 2329.520 kb on - strand, within ulaR at 2329.587 kb on + strand, within ulaR at 2329.619 kb on - strand, within ulaR at 2329.708 kb on + strand, within ulaR at 2329.708 kb on + strand, within ulaR at 2329.712 kb on + strand, within ulaR at 2329.716 kb on + strand, within ulaR at 2329.778 kb on + strand, within ulaR at 2329.779 kb on - strand, within ulaR at 2329.886 kb on + strand, within ulaR at 2329.888 kb on + strand, within ulaR at 2329.888 kb on + strand, within ulaR at 2329.888 kb on + strand, within ulaR at 2329.888 kb on + strand, within ulaR at 2329.953 kb on + strand, within ulaR at 2329.963 kb on + strand, within ulaR at 2329.963 kb on + strand, within ulaR at 2329.969 kb on + strand, within ulaR at 2330.135 kb on - strand at 2330.213 kb on - strand, within yjfP
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 2,327,287 + ulaA OKFHMN_12150 0.62 -4.4 2,327,288 - ulaA OKFHMN_12150 0.62 -0.2 2,327,288 - ulaA OKFHMN_12150 0.62 +1.8 2,327,343 - ulaA OKFHMN_12150 0.66 -1.2 2,327,467 + ulaA OKFHMN_12150 0.75 -0.4 2,327,467 + ulaA OKFHMN_12150 0.75 +0.8 2,327,467 + ulaA OKFHMN_12150 0.75 +0.9 2,327,497 - ulaA OKFHMN_12150 0.77 -0.7 2,327,516 + ulaA OKFHMN_12150 0.78 -0.6 2,327,516 + ulaA OKFHMN_12150 0.78 -0.2 2,327,516 + ulaA OKFHMN_12150 0.78 -0.0 2,327,517 - ulaA OKFHMN_12150 0.78 -0.1 2,327,517 - ulaA OKFHMN_12150 0.78 -0.5 2,327,517 - ulaA OKFHMN_12150 0.78 +2.0 2,327,518 + ulaA OKFHMN_12150 0.78 -0.1 2,327,560 + ulaA OKFHMN_12150 0.81 -1.0 2,327,560 + ulaA OKFHMN_12150 0.81 +0.1 2,327,674 - ulaA OKFHMN_12150 0.90 +0.2 2,327,699 + -0.3 2,327,728 + +1.5 2,327,729 - -0.4 2,327,747 + +0.1 2,327,747 + -0.6 2,327,806 + +0.4 2,327,806 + +0.2 2,327,841 + -3.0 2,328,165 + +0.2 2,328,192 - +0.2 2,328,390 - ulaG OKFHMN_12155 0.20 +0.1 2,328,461 + ulaG OKFHMN_12155 0.27 +0.2 2,328,462 - ulaG OKFHMN_12155 0.27 +0.4 2,328,539 + ulaG OKFHMN_12155 0.34 -0.5 2,328,540 - ulaG OKFHMN_12155 0.34 -1.1 2,328,589 + ulaG OKFHMN_12155 0.39 +0.4 2,328,596 + ulaG OKFHMN_12155 0.40 -0.5 2,328,679 + ulaG OKFHMN_12155 0.47 -0.9 2,328,728 + ulaG OKFHMN_12155 0.52 -0.4 2,328,808 - ulaG OKFHMN_12155 0.60 -0.1 2,328,808 - ulaG OKFHMN_12155 0.60 +0.3 2,328,859 - ulaG OKFHMN_12155 0.64 +0.7 2,328,864 - ulaG OKFHMN_12155 0.65 +0.3 2,328,868 - ulaG OKFHMN_12155 0.65 -2.7 2,329,095 + ulaG OKFHMN_12155 0.86 -0.2 2,329,095 + ulaG OKFHMN_12155 0.86 -0.2 2,329,237 - +0.1 2,329,248 + +0.0 2,329,248 + +0.1 2,329,249 - -0.0 2,329,287 - +0.0 2,329,289 + +0.5 2,329,468 + ulaR OKFHMN_12160 0.16 -0.1 2,329,468 + ulaR OKFHMN_12160 0.16 -0.9 2,329,468 + ulaR OKFHMN_12160 0.16 -1.2 2,329,519 + ulaR OKFHMN_12160 0.23 -0.4 2,329,520 - ulaR OKFHMN_12160 0.23 -0.2 2,329,587 + ulaR OKFHMN_12160 0.32 -1.1 2,329,619 - ulaR OKFHMN_12160 0.36 -0.4 2,329,708 + ulaR OKFHMN_12160 0.48 -0.1 2,329,708 + ulaR OKFHMN_12160 0.48 -0.5 2,329,712 + ulaR OKFHMN_12160 0.48 -0.2 2,329,716 + ulaR OKFHMN_12160 0.49 -0.2 2,329,778 + ulaR OKFHMN_12160 0.57 -0.5 2,329,779 - ulaR OKFHMN_12160 0.57 +0.5 2,329,886 + ulaR OKFHMN_12160 0.71 -0.5 2,329,888 + ulaR OKFHMN_12160 0.72 -0.6 2,329,888 + ulaR OKFHMN_12160 0.72 +0.1 2,329,888 + ulaR OKFHMN_12160 0.72 +0.3 2,329,888 + ulaR OKFHMN_12160 0.72 -0.4 2,329,953 + ulaR OKFHMN_12160 0.80 +0.6 2,329,963 + ulaR OKFHMN_12160 0.82 -0.7 2,329,963 + ulaR OKFHMN_12160 0.82 -0.6 2,329,969 + ulaR OKFHMN_12160 0.82 +0.1 2,330,135 - -1.0 2,330,213 - yjfP OKFHMN_12165 0.15 -0.0
Or see this region's nucleotide sequence