Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yjfZ and rplI are separated by 70 nucleotides rplI and rpsR are separated by 41 nucleotides rpsR and priB are separated by 4 nucleotides priB and rpsF are separated by 6 nucleotides rpsF and yjfY are separated by 326 nucleotides
OKFHMN_12095: yjfZ - Uncharacterized protein YjfZ, at 2,320,615 to 2,321,172
yjfZ
OKFHMN_12100: rplI - 50S ribosomal protein L9, at 2,321,243 to 2,321,692
rplI
OKFHMN_12105: rpsR - 30S ribosomal protein S18, at 2,321,734 to 2,321,961
rpsR
OKFHMN_12110: priB - primosomal replication protein N, at 2,321,966 to 2,322,280
priB
OKFHMN_12115: rpsF - 30S ribosomal protein S6, at 2,322,287 to 2,322,682
rpsF
OKFHMN_12120: yjfY - Uncharacterized protein YjfY, at 2,323,009 to 2,323,284
yjfY
Position (kb)
2321
2322
2323 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2320.970 kb on + strand, within yjfZ at 2320.971 kb on - strand, within yjfZ at 2321.097 kb on + strand, within yjfZ at 2321.097 kb on + strand, within yjfZ at 2321.101 kb on + strand, within yjfZ at 2321.102 kb on - strand, within yjfZ at 2321.102 kb on - strand, within yjfZ at 2321.129 kb on + strand at 2321.129 kb on + strand at 2321.159 kb on - strand at 2321.170 kb on + strand at 2321.170 kb on + strand at 2321.429 kb on - strand, within rplI at 2321.715 kb on - strand at 2322.825 kb on - strand at 2322.825 kb on - strand at 2322.852 kb on - strand at 2323.004 kb on + strand at 2323.005 kb on - strand at 2323.005 kb on - strand at 2323.005 kb on - strand at 2323.005 kb on - strand at 2323.005 kb on - strand at 2323.005 kb on - strand at 2323.008 kb on + strand at 2323.008 kb on + strand at 2323.008 kb on + strand at 2323.009 kb on - strand at 2323.059 kb on + strand, within yjfY at 2323.059 kb on + strand, within yjfY at 2323.059 kb on + strand, within yjfY at 2323.060 kb on - strand, within yjfY at 2323.060 kb on - strand, within yjfY at 2323.083 kb on + strand, within yjfY at 2323.084 kb on - strand, within yjfY at 2323.101 kb on + strand, within yjfY at 2323.102 kb on - strand, within yjfY at 2323.132 kb on + strand, within yjfY at 2323.132 kb on + strand, within yjfY at 2323.134 kb on + strand, within yjfY at 2323.178 kb on + strand, within yjfY at 2323.178 kb on + strand, within yjfY at 2323.179 kb on - strand, within yjfY at 2323.210 kb on + strand, within yjfY at 2323.210 kb on + strand, within yjfY at 2323.210 kb on + strand, within yjfY at 2323.213 kb on + strand, within yjfY at 2323.214 kb on - strand, within yjfY at 2323.220 kb on + strand, within yjfY at 2323.221 kb on - strand, within yjfY at 2323.254 kb on + strand, within yjfY at 2323.255 kb on - strand, within yjfY at 2323.255 kb on - strand, within yjfY at 2323.272 kb on + strand at 2323.272 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 2,320,970 + yjfZ OKFHMN_12095 0.64 -0.6 2,320,971 - yjfZ OKFHMN_12095 0.64 -3.0 2,321,097 + yjfZ OKFHMN_12095 0.86 +0.9 2,321,097 + yjfZ OKFHMN_12095 0.86 +0.7 2,321,101 + yjfZ OKFHMN_12095 0.87 -0.2 2,321,102 - yjfZ OKFHMN_12095 0.87 +0.3 2,321,102 - yjfZ OKFHMN_12095 0.87 -1.7 2,321,129 + -0.3 2,321,129 + -0.1 2,321,159 - -1.2 2,321,170 + +0.5 2,321,170 + +2.7 2,321,429 - rplI OKFHMN_12100 0.41 -0.8 2,321,715 - -1.0 2,322,825 - +0.3 2,322,825 - +0.8 2,322,852 - +1.1 2,323,004 + -0.5 2,323,005 - +0.3 2,323,005 - -0.6 2,323,005 - +1.1 2,323,005 - -0.4 2,323,005 - -0.1 2,323,005 - +0.4 2,323,008 + -1.4 2,323,008 + +0.4 2,323,008 + +0.0 2,323,009 - +0.4 2,323,059 + yjfY OKFHMN_12120 0.18 -0.7 2,323,059 + yjfY OKFHMN_12120 0.18 -0.4 2,323,059 + yjfY OKFHMN_12120 0.18 +0.8 2,323,060 - yjfY OKFHMN_12120 0.18 -0.4 2,323,060 - yjfY OKFHMN_12120 0.18 -4.0 2,323,083 + yjfY OKFHMN_12120 0.27 +0.2 2,323,084 - yjfY OKFHMN_12120 0.27 +1.4 2,323,101 + yjfY OKFHMN_12120 0.33 +0.3 2,323,102 - yjfY OKFHMN_12120 0.34 +0.7 2,323,132 + yjfY OKFHMN_12120 0.45 -0.3 2,323,132 + yjfY OKFHMN_12120 0.45 -1.9 2,323,134 + yjfY OKFHMN_12120 0.45 +0.5 2,323,178 + yjfY OKFHMN_12120 0.61 +0.3 2,323,178 + yjfY OKFHMN_12120 0.61 +0.3 2,323,179 - yjfY OKFHMN_12120 0.62 -0.1 2,323,210 + yjfY OKFHMN_12120 0.73 +0.1 2,323,210 + yjfY OKFHMN_12120 0.73 +0.1 2,323,210 + yjfY OKFHMN_12120 0.73 -0.4 2,323,213 + yjfY OKFHMN_12120 0.74 -0.1 2,323,214 - yjfY OKFHMN_12120 0.74 +0.3 2,323,220 + yjfY OKFHMN_12120 0.76 +1.0 2,323,221 - yjfY OKFHMN_12120 0.77 +0.5 2,323,254 + yjfY OKFHMN_12120 0.89 +0.6 2,323,255 - yjfY OKFHMN_12120 0.89 -0.6 2,323,255 - yjfY OKFHMN_12120 0.89 -0.5 2,323,272 + +0.5 2,323,272 + +0.5
Or see this region's nucleotide sequence