Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ylbG and OKFHMN_07955 are separated by 743 nucleotides OKFHMN_07955 and OKFHMN_07960 overlap by 20 nucleotides OKFHMN_07960 and ybbP are separated by 429 nucleotides
OKFHMN_07950: ylbG - Uncharacterized protein YlbG, at 1,450,703 to 1,451,074
ylbG
OKFHMN_07955: OKFHMN_07955 - Protein, at 1,451,818 to 1,452,078
_07955
OKFHMN_07960: OKFHMN_07960 - RHS element protein, at 1,452,059 to 1,456,255
_07960
OKFHMN_07965: ybbP - Uncharacterized ABC transporter permease YbbP, at 1,456,685 to 1,459,099
ybbP
Position (kb)
1452
1453
1454
1455
1456
1457 Strain fitness (log2 ratio)
-1
0
1 at 1451.578 kb on - strand at 1451.710 kb on + strand at 1452.355 kb on + strand at 1452.409 kb on - strand at 1452.534 kb on + strand, within OKFHMN_07960 at 1452.535 kb on - strand, within OKFHMN_07960 at 1452.579 kb on + strand, within OKFHMN_07960 at 1452.601 kb on - strand, within OKFHMN_07960 at 1452.643 kb on - strand, within OKFHMN_07960 at 1452.721 kb on - strand, within OKFHMN_07960 at 1452.959 kb on + strand, within OKFHMN_07960 at 1452.960 kb on - strand, within OKFHMN_07960 at 1453.087 kb on - strand, within OKFHMN_07960 at 1453.150 kb on - strand, within OKFHMN_07960 at 1454.511 kb on + strand, within OKFHMN_07960 at 1454.593 kb on - strand, within OKFHMN_07960 at 1454.694 kb on + strand, within OKFHMN_07960 at 1454.694 kb on + strand, within OKFHMN_07960 at 1454.718 kb on - strand, within OKFHMN_07960 at 1455.223 kb on - strand, within OKFHMN_07960 at 1455.288 kb on + strand, within OKFHMN_07960 at 1456.271 kb on - strand at 1456.673 kb on + strand at 1456.677 kb on + strand at 1456.925 kb on - strand at 1457.023 kb on + strand, within ybbP at 1457.024 kb on - strand, within ybbP at 1457.070 kb on - strand, within ybbP at 1457.126 kb on - strand, within ybbP at 1457.217 kb on - strand, within ybbP
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 1,451,578 - +0.4 1,451,710 + +0.3 1,452,355 + +0.1 1,452,409 - -0.3 1,452,534 + OKFHMN_07960 0.11 -0.6 1,452,535 - OKFHMN_07960 0.11 -0.3 1,452,579 + OKFHMN_07960 0.12 +0.3 1,452,601 - OKFHMN_07960 0.13 -0.1 1,452,643 - OKFHMN_07960 0.14 -0.0 1,452,721 - OKFHMN_07960 0.16 -1.4 1,452,959 + OKFHMN_07960 0.21 -0.9 1,452,960 - OKFHMN_07960 0.21 +0.7 1,453,087 - OKFHMN_07960 0.24 +0.7 1,453,150 - OKFHMN_07960 0.26 -0.4 1,454,511 + OKFHMN_07960 0.58 +0.3 1,454,593 - OKFHMN_07960 0.60 -0.2 1,454,694 + OKFHMN_07960 0.63 -0.0 1,454,694 + OKFHMN_07960 0.63 +0.4 1,454,718 - OKFHMN_07960 0.63 +1.4 1,455,223 - OKFHMN_07960 0.75 +0.8 1,455,288 + OKFHMN_07960 0.77 -1.7 1,456,271 - -1.0 1,456,673 + -0.8 1,456,677 + +0.7 1,456,925 - -0.2 1,457,023 + ybbP OKFHMN_07965 0.14 +0.0 1,457,024 - ybbP OKFHMN_07965 0.14 +0.1 1,457,070 - ybbP OKFHMN_07965 0.16 -0.1 1,457,126 - ybbP OKFHMN_07965 0.18 +0.3 1,457,217 - ybbP OKFHMN_07965 0.22 -0.2
Or see this region's nucleotide sequence