Strain Fitness in Escherichia coli ECRC62 around BNILDI_17530

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
3,525,305	+	adhP	BNILDI_17525	0.16	+0.1
3,525,401	-	adhP	BNILDI_17525	0.25	+1.3
3,525,429	+	adhP	BNILDI_17525	0.28	-0.2
3,525,430	-	adhP	BNILDI_17525	0.28	-0.1
3,525,573	+	adhP	BNILDI_17525	0.42	-0.0
3,525,574	-	adhP	BNILDI_17525	0.42	+0.9
3,525,574	-	adhP	BNILDI_17525	0.42	-1.2
3,525,595	+	adhP	BNILDI_17525	0.45	-0.4
3,525,595	+	adhP	BNILDI_17525	0.45	+0.2
3,525,607	-	adhP	BNILDI_17525	0.46	-0.1
3,525,642	+	adhP	BNILDI_17525	0.49	-0.4
3,525,643	-	adhP	BNILDI_17525	0.49	-0.5
3,525,647	-	adhP	BNILDI_17525	0.50	-0.1
3,525,647	-	adhP	BNILDI_17525	0.50	-3.0
3,525,682	+	adhP	BNILDI_17525	0.53	+0.9
3,525,683	-	adhP	BNILDI_17525	0.53	-0.1
3,525,683	-	adhP	BNILDI_17525	0.53	+0.2
3,525,937	-	adhP	BNILDI_17525	0.78	+0.2
3,526,337	+	yddM	BNILDI_17530	0.12	-2.2
3,526,338	-	yddM	BNILDI_17530	0.13	-0.2
3,526,362	-	yddM	BNILDI_17530	0.21	-0.2
3,526,362	-	yddM	BNILDI_17530	0.21	+1.1
3,526,638	+				-1.6
3,526,639	-				-0.0
3,526,639	-				-0.3
3,526,639	-				+0.2
3,526,751	-	fdnI	BNILDI_17535	0.17	+0.2
3,526,779	+	fdnI	BNILDI_17535	0.22	-1.4
3,526,779	+	fdnI	BNILDI_17535	0.22	-0.2
3,526,779	+	fdnI	BNILDI_17535	0.22	-1.4
3,526,779	+	fdnI	BNILDI_17535	0.22	+1.6
3,526,779	+	fdnI	BNILDI_17535	0.22	-1.2
3,526,780	-	fdnI	BNILDI_17535	0.22	+0.4
3,526,780	-	fdnI	BNILDI_17535	0.22	+2.1
3,526,780	-	fdnI	BNILDI_17535	0.22	-0.3
3,526,780	-	fdnI	BNILDI_17535	0.22	-0.2
3,526,783	+	fdnI	BNILDI_17535	0.22	+0.3
3,526,783	+	fdnI	BNILDI_17535	0.22	-0.2
3,526,783	+	fdnI	BNILDI_17535	0.22	-0.2
3,526,866	+	fdnI	BNILDI_17535	0.35	+0.3
3,526,866	+	fdnI	BNILDI_17535	0.35	+0.4
3,526,891	+	fdnI	BNILDI_17535	0.39	+1.6
3,526,966	-	fdnI	BNILDI_17535	0.50	-0.7
3,526,966	-	fdnI	BNILDI_17535	0.50	+0.5
3,526,969	+	fdnI	BNILDI_17535	0.51	-0.5
3,527,007	-	fdnI	BNILDI_17535	0.57	+0.5
3,527,035	+	fdnI	BNILDI_17535	0.61	-0.6
3,527,080	+	fdnI	BNILDI_17535	0.68	-0.5
3,527,081	-	fdnI	BNILDI_17535	0.68	-0.5
3,527,458	+	fdnH	BNILDI_17540	0.20	-0.8
3,527,459	-	fdnH	BNILDI_17540	0.20	+0.7
3,527,491	+	fdnH	BNILDI_17540	0.24	-0.6
3,527,495	+	fdnH	BNILDI_17540	0.24	+0.6
3,527,495	+	fdnH	BNILDI_17540	0.24	+1.5
3,527,495	+	fdnH	BNILDI_17540	0.24	-0.3
3,527,496	-	fdnH	BNILDI_17540	0.24	+0.1
3,527,527	+	fdnH	BNILDI_17540	0.28	-0.3
3,527,527	+	fdnH	BNILDI_17540	0.28	-2.0
3,527,528	-	fdnH	BNILDI_17540	0.28	+0.6