Strain Fitness in Escherichia coli ECRC62 around BNILDI_10965

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
2,214,741	-	hypB	BNILDI_10955	0.53	+1.2
2,215,111	+				+0.2
2,215,142	+				-0.3
2,215,142	+				-0.3
2,215,143	-				+0.1
2,215,143	-				-1.0
2,215,164	+				+0.5
2,215,165	-				+0.3
2,215,186	-				-0.1
2,215,209	+	hypA	BNILDI_10960	0.16	-1.0
2,215,210	-	hypA	BNILDI_10960	0.17	-0.3
2,215,267	+	hypA	BNILDI_10960	0.33	+0.2
2,215,267	+	hypA	BNILDI_10960	0.33	+1.9
2,215,268	-	hypA	BNILDI_10960	0.33	-0.6
2,215,268	-	hypA	BNILDI_10960	0.33	-0.0
2,215,268	-	hypA	BNILDI_10960	0.33	+0.9
2,215,426	-	hypA	BNILDI_10960	0.78	+0.7
2,215,426	-	hypA	BNILDI_10960	0.78	-0.3
2,215,515	+				-1.6
2,215,520	-				-0.2
2,215,520	-				-0.1
2,215,720	-				-0.1
2,215,720	-				+1.0
2,215,773	-	hycA	BNILDI_10965	0.13	-0.6
2,215,793	-	hycA	BNILDI_10965	0.17	-0.2
2,215,948	+	hycA	BNILDI_10965	0.51	+0.4
2,215,951	+	hycA	BNILDI_10965	0.51	-0.9
2,215,951	+	hycA	BNILDI_10965	0.51	+0.2
2,215,951	+	hycA	BNILDI_10965	0.51	-1.6
2,216,069	-	hycA	BNILDI_10965	0.77	+1.5
2,216,103	-	hycA	BNILDI_10965	0.84	-1.4
2,216,103	-	hycA	BNILDI_10965	0.84	+0.5
2,216,103	-	hycA	BNILDI_10965	0.84	-0.1
2,216,104	+	hycA	BNILDI_10965	0.84	+0.4
2,216,104	+	hycA	BNILDI_10965	0.84	+0.4
2,216,151	-				+0.0
2,216,313	+				-0.0
2,216,314	-				+0.2
2,216,422	-	hycB	BNILDI_10970	0.20	+0.9
2,216,422	-	hycB	BNILDI_10970	0.20	+0.2
2,216,547	+	hycB	BNILDI_10970	0.40	+0.1
2,216,851	+				-0.4
2,216,905	+				+0.3
2,216,906	-				-2.5
2,217,041	-				+0.9
2,217,042	+				-0.9
2,217,108	-	hycC	BNILDI_10975	0.11	+0.4
2,217,113	-	hycC	BNILDI_10975	0.11	+0.4
2,217,113	-	hycC	BNILDI_10975	0.11	+0.9
2,217,113	-	hycC	BNILDI_10975	0.11	-1.2
2,217,135	+	hycC	BNILDI_10975	0.12	-1.3