Strain Fitness in Escherichia coli ECRC62 around BNILDI_05590

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
1,103,469	+				+0.0
1,103,553	+				+0.7
1,103,554	-				-0.1
1,103,554	-				+0.4
1,103,554	-				-0.1
1,103,554	-				-3.1
1,103,590	-				+0.2
1,103,590	-				+0.2
1,103,590	-				-0.1
1,103,590	-				-0.2
1,103,707	+	tpiA	BNILDI_05585	0.15	-2.6
1,103,718	-	tpiA	BNILDI_05585	0.17	-2.4
1,104,372	+				-2.6
1,104,375	-				+0.1
1,104,430	-				+0.3
1,104,584	+	yiiQ	BNILDI_05590	0.20	-0.2
1,104,584	+	yiiQ	BNILDI_05590	0.20	+0.4
1,104,585	-	yiiQ	BNILDI_05590	0.20	-1.1
1,104,686	+	yiiQ	BNILDI_05590	0.37	-0.1
1,104,686	+	yiiQ	BNILDI_05590	0.37	+0.4
1,104,686	+	yiiQ	BNILDI_05590	0.37	-0.1
1,104,797	+	yiiQ	BNILDI_05590	0.56	-0.3
1,104,797	+	yiiQ	BNILDI_05590	0.56	-0.2
1,104,798	-	yiiQ	BNILDI_05590	0.56	+1.4
1,104,816	+	yiiQ	BNILDI_05590	0.59	+0.9
1,105,030	+				+0.2
1,105,030	+				+0.2
1,105,030	+				-0.4
1,105,030	+				-0.3
1,105,031	-				-0.0
1,105,031	-				-0.3
1,105,048	-				-0.2
1,105,069	+				+0.1
1,105,070	-				-0.8
1,105,128	-				+1.4
1,105,161	-				-1.1
1,105,170	+				+0.2
1,105,170	+				+0.2
1,105,170	+				+1.0
1,105,171	-				+0.4
1,105,552	+	yiiR	BNILDI_05595	0.88	+0.2
1,105,575	-				+1.1
1,105,598	-				-2.2
1,105,611	+				+0.3
1,105,646	-				+0.7
1,105,738	-				+0.2
1,105,774	-				-0.2
1,105,801	+				-0.2
1,105,802	-				-0.1
1,105,802	-				-0.3
1,105,832	+				-0.4
1,105,832	+				+0.9
1,105,842	-				-1.5
1,105,892	+	yfcZ	BNILDI_05600	0.26	+0.7
1,105,892	+	yfcZ	BNILDI_05600	0.26	+0.4
1,105,893	-	yfcZ	BNILDI_05600	0.26	-0.5
1,105,893	-	yfcZ	BNILDI_05600	0.26	-0.2
1,105,898	+	yfcZ	BNILDI_05600	0.28	-0.5
1,105,899	-	yfcZ	BNILDI_05600	0.28	-0.1
1,105,943	+	yfcZ	BNILDI_05600	0.43	-1.5