Strain Fitness in Escherichia coli ECRC62 around BNILDI_00600

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
116,131	+	glcD	BNILDI_00595	0.57	+0.1
116,131	+	glcD	BNILDI_00595	0.57	+0.9
116,245	+	glcD	BNILDI_00595	0.65	-0.9
116,347	-	glcD	BNILDI_00595	0.71	+0.5
116,356	+	glcD	BNILDI_00595	0.72	+0.1
116,538	-	glcD	BNILDI_00595	0.84	-1.7
116,669	-				+0.1
116,763	+				+0.8
116,984	+				+0.1
116,984	+				-0.6
116,985	-				-1.0
116,985	-				-0.4
117,006	-				+1.3
117,048	-				+0.6
117,083	-				+0.8
117,207	-	glcC	BNILDI_00600	0.24	+0.1
117,207	-	glcC	BNILDI_00600	0.24	-0.7
117,309	+	glcC	BNILDI_00600	0.37	+0.5
117,560	+	glcC	BNILDI_00600	0.70	-0.8
117,584	+	glcC	BNILDI_00600	0.73	-0.1
117,584	+	glcC	BNILDI_00600	0.73	-0.3
117,584	+	glcC	BNILDI_00600	0.73	+0.4
117,584	+	glcC	BNILDI_00600	0.73	-0.3
117,591	+	glcC	BNILDI_00600	0.74	-0.9
117,643	-	glcC	BNILDI_00600	0.81	+0.3
117,800	-				-0.9
117,814	+				-0.8
117,832	+				-0.0
117,863	+				-0.6
117,863	+				+2.0
117,864	-				+0.1
117,864	-				+0.6
117,864	-				+1.1
118,171	+	yghO	BNILDI_00605	0.33	+0.1
118,171	+	yghO	BNILDI_00605	0.33	-0.6
118,172	-	yghO	BNILDI_00605	0.33	-0.3
118,179	-	yghO	BNILDI_00605	0.33	-0.0
118,179	-	yghO	BNILDI_00605	0.33	-0.9
118,454	+	yghO	BNILDI_00605	0.57	-0.3
118,455	-	yghO	BNILDI_00605	0.57	-0.0
118,465	+	yghO	BNILDI_00605	0.58	+0.6
118,572	-	yghO	BNILDI_00605	0.68	-0.9
118,572	-	yghO	BNILDI_00605	0.68	+0.8
118,701	-	yghO	BNILDI_00605	0.79	-0.9
118,704	+	yghO	BNILDI_00605	0.79	-0.5
118,704	+	yghO	BNILDI_00605	0.79	-1.2
118,705	-	yghO	BNILDI_00605	0.79	+0.4
118,705	-	yghO	BNILDI_00605	0.79	-1.2
118,769	+	yghO	BNILDI_00605	0.85	-0.1