Strain Fitness in Escherichia coli ECOR38 around HEPCGN_15410

Experiment: Sodium-DL-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sodium-DL-Lactate
1,846,318	+		HEPCGN_15395	0.83	+1.3
1,846,342	+		HEPCGN_15395	0.85	+0.3
1,846,343	-		HEPCGN_15395	0.85	+0.1
1,846,550	+				-0.3
1,846,741	+		HEPCGN_15400	0.56	-0.4
1,846,741	+		HEPCGN_15400	0.56	+0.7
1,846,749	+		HEPCGN_15400	0.59	+0.6
1,846,749	+		HEPCGN_15400	0.59	+0.2
1,846,798	+		HEPCGN_15400	0.77	-0.3
1,846,837	-				+0.7
1,846,839	+				-0.4
1,846,839	+				+0.5
1,846,840	-				+0.5
1,846,840	-				+0.2
1,846,843	+				-1.3
1,846,843	+				+0.2
1,846,843	+				-0.4
1,846,843	+				-0.9
1,846,843	+				-0.4
1,846,844	-				+0.4
1,846,845	+				-0.9
1,846,885	-				+0.5
1,846,885	-				-3.9
1,846,918	+	hicB	HEPCGN_15405	0.17	-0.8
1,846,918	+	hicB	HEPCGN_15405	0.17	+0.2
1,846,918	+	hicB	HEPCGN_15405	0.17	+0.3
1,846,919	-	hicB	HEPCGN_15405	0.17	+0.9
1,847,049	+	hicB	HEPCGN_15405	0.53	-1.6
1,847,091	+	hicB	HEPCGN_15405	0.65	-0.4
1,847,092	-	hicB	HEPCGN_15405	0.65	-0.2
1,847,101	-	hicB	HEPCGN_15405	0.68	-0.2
1,847,105	+	hicB	HEPCGN_15405	0.69	+0.1
1,847,169	-	hicB	HEPCGN_15405	0.86	-2.2
1,847,172	+	hicB	HEPCGN_15405	0.87	-2.8
1,847,176	+	hicB	HEPCGN_15405	0.88	-0.1
1,847,178	+	hicB	HEPCGN_15405	0.89	+0.1
1,847,214	-				+0.3
1,847,269	-				+1.4
1,847,322	+				-0.0
1,847,322	+				+1.0
1,847,323	-				+0.4
1,847,323	-				-0.8
1,847,389	+	fba	HEPCGN_15410	0.14	+1.2
1,847,389	+	fba	HEPCGN_15410	0.14	-3.9
1,847,398	-	fba	HEPCGN_15410	0.15	-1.0
1,847,398	-	fba	HEPCGN_15410	0.15	-2.1
1,847,420	-	fba	HEPCGN_15410	0.18	-0.4
1,847,467	-	fba	HEPCGN_15410	0.23	+1.2
1,847,484	-	fba	HEPCGN_15410	0.25	-0.1
1,847,486	+	fba	HEPCGN_15410	0.25	+0.1
1,847,486	+	fba	HEPCGN_15410	0.25	+0.4
1,847,580	-	fba	HEPCGN_15410	0.36	+0.2
1,847,608	+	fba	HEPCGN_15410	0.40	-0.1
1,847,789	-	fba	HEPCGN_15410	0.61	-0.8
1,847,833	+	fba	HEPCGN_15410	0.66	+1.1
1,847,941	-	fba	HEPCGN_15410	0.78	+0.9
1,848,058	+				-0.4
1,848,157	-				-0.5
1,848,279	-	ptsH	HEPCGN_15415	0.44	+0.2
1,848,320	-	ptsH	HEPCGN_15415	0.60	-0.1
1,848,343	+	ptsH	HEPCGN_15415	0.68	+0.3
1,848,428	+				-0.2
1,848,449	-				+0.7
1,848,472	+				+0.8
1,848,517	+				+1.0
1,848,518	-				-1.5
1,848,528	-				+0.8
1,848,559	+				+0.7
1,848,602	-	xylB	HEPCGN_15420	0.12	-2.8
1,848,628	-	xylB	HEPCGN_15420	0.14	+0.2
1,848,691	-	xylB	HEPCGN_15420	0.18	+0.6
1,848,739	-	xylB	HEPCGN_15420	0.21	-0.7
1,848,797	-	xylB	HEPCGN_15420	0.25	+0.6
1,848,808	-	xylB	HEPCGN_15420	0.26	+0.4
1,848,811	+	xylB	HEPCGN_15420	0.26	-1.2
1,848,891	+	xylB	HEPCGN_15420	0.31	-1.4
1,848,951	+	xylB	HEPCGN_15420	0.35	+0.8
1,848,952	-	xylB	HEPCGN_15420	0.35	+0.5
1,848,993	+	xylB	HEPCGN_15420	0.38	+0.3
1,849,065	-	xylB	HEPCGN_15420	0.43	-0.2