Strain Fitness in Escherichia coli ECOR38 around HEPCGN_03025

Experiment: Sodium-DL-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sodium-DL-Lactate
512,808	+	wcaA	HEPCGN_03015	0.44	+0.8
512,903	+	wcaA	HEPCGN_03015	0.55	+1.4
513,264	-				+1.6
513,524	-	wcaB	HEPCGN_03020	0.50	-1.4
513,658	+	wcaB	HEPCGN_03020	0.77	-0.6
513,671	-	wcaB	HEPCGN_03020	0.80	+0.5
513,764	-				+0.7
513,764	-				+0.1
513,771	+				-0.6
513,771	+				+0.4
513,939	+	wcaC	HEPCGN_03025	0.14	-1.0
514,021	+	wcaC	HEPCGN_03025	0.21	+0.3
514,255	-	wcaC	HEPCGN_03025	0.40	-0.1
514,348	-	wcaC	HEPCGN_03025	0.48	+1.0
514,390	+	wcaC	HEPCGN_03025	0.51	+0.8
514,426	-	wcaC	HEPCGN_03025	0.54	+0.6
514,590	+	wcaC	HEPCGN_03025	0.68	+1.4
514,590	+	wcaC	HEPCGN_03025	0.68	-0.5
514,590	+	wcaC	HEPCGN_03025	0.68	+1.1
514,591	-	wcaC	HEPCGN_03025	0.68	-2.6
514,623	+	wcaC	HEPCGN_03025	0.70	+0.4
514,720	+	wcaC	HEPCGN_03025	0.78	-1.6
514,883	+				-0.5
514,957	+				-0.7
514,981	+				+1.5
514,986	-				+1.8
515,006	+				+1.2
515,028	+				+0.1
515,161	+	wcaD	HEPCGN_03030	0.17	-0.3
515,194	+	wcaD	HEPCGN_03030	0.19	+0.4
515,199	-	wcaD	HEPCGN_03030	0.20	-0.5
515,239	+	wcaD	HEPCGN_03030	0.23	-2.5
515,240	-	wcaD	HEPCGN_03030	0.23	-0.4
515,293	+	wcaD	HEPCGN_03030	0.28	+1.0
515,313	-	wcaD	HEPCGN_03030	0.29	-0.1
515,387	-	wcaD	HEPCGN_03030	0.35	+1.7
515,389	+	wcaD	HEPCGN_03030	0.35	+0.0
515,429	+	wcaD	HEPCGN_03030	0.39	-0.3
515,566	+	wcaD	HEPCGN_03030	0.50	+0.1
515,880	-	wcaD	HEPCGN_03030	0.76	-1.5