Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yeeY and yoeI are separated by 214 nucleotides yoeI and plaP overlap by 11 nucleotides plaP and yeeE are separated by 232 nucleotides
HEPCGN_03240: yeeY - Uncharacterized HTH-type transcriptional regulator YeeY, at 559,362 to 560,312
yeeY
HEPCGN_03250: yoeI - Uncharacterized protein YoeI, at 560,527 to 560,589
yoeI
HEPCGN_03255: plaP - putrescine/proton symporter PlaP, at 560,579 to 561,937
plaP
HEPCGN_03260: yeeE - transport protein YeeE, at 562,170 to 563,174
yeeE
Position (kb) 560
561
562 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 559.729 kb on - strand, within yeeY at 559.761 kb on - strand, within yeeY at 559.818 kb on - strand, within yeeY at 559.950 kb on - strand, within yeeY at 559.962 kb on + strand, within yeeY at 560.104 kb on + strand, within yeeY at 560.104 kb on + strand, within yeeY at 560.259 kb on - strand at 560.278 kb on - strand at 560.481 kb on + strand at 560.482 kb on - strand at 560.556 kb on + strand, within yoeI at 560.557 kb on - strand, within yoeI at 560.649 kb on + strand at 560.649 kb on + strand at 560.668 kb on + strand at 560.668 kb on + strand at 560.783 kb on + strand, within plaP at 560.825 kb on + strand, within plaP at 560.825 kb on + strand, within plaP at 560.832 kb on - strand, within plaP at 560.894 kb on + strand, within plaP at 560.999 kb on - strand, within plaP at 560.999 kb on - strand, within plaP at 561.020 kb on - strand, within plaP at 561.020 kb on - strand, within plaP at 561.052 kb on - strand, within plaP at 561.339 kb on - strand, within plaP at 561.413 kb on + strand, within plaP at 561.515 kb on + strand, within plaP at 561.515 kb on + strand, within plaP at 561.516 kb on - strand, within plaP at 561.564 kb on + strand, within plaP at 561.564 kb on + strand, within plaP at 561.565 kb on - strand, within plaP at 561.595 kb on + strand, within plaP at 561.595 kb on + strand, within plaP at 561.921 kb on - strand at 561.973 kb on + strand at 562.017 kb on + strand at 562.020 kb on + strand at 562.092 kb on - strand at 562.115 kb on + strand at 562.215 kb on + strand at 562.216 kb on - strand at 562.216 kb on - strand at 562.315 kb on - strand, within yeeE at 562.351 kb on + strand, within yeeE at 562.351 kb on + strand, within yeeE at 562.351 kb on + strand, within yeeE at 562.461 kb on + strand, within yeeE at 562.461 kb on + strand, within yeeE at 562.461 kb on + strand, within yeeE at 562.463 kb on + strand, within yeeE at 562.464 kb on - strand, within yeeE at 562.528 kb on - strand, within yeeE at 562.541 kb on + strand, within yeeE at 562.541 kb on + strand, within yeeE at 562.548 kb on - strand, within yeeE at 562.730 kb on - strand, within yeeE at 562.785 kb on - strand, within yeeE at 562.855 kb on - strand, within yeeE at 562.859 kb on + strand, within yeeE
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 559,729 - yeeY HEPCGN_03240 0.39 -0.4 559,761 - yeeY HEPCGN_03240 0.42 -0.1 559,818 - yeeY HEPCGN_03240 0.48 -1.2 559,950 - yeeY HEPCGN_03240 0.62 +0.2 559,962 + yeeY HEPCGN_03240 0.63 +0.6 560,104 + yeeY HEPCGN_03240 0.78 -3.7 560,104 + yeeY HEPCGN_03240 0.78 -0.6 560,259 - -0.1 560,278 - +0.1 560,481 + +0.8 560,482 - +0.9 560,556 + yoeI HEPCGN_03250 0.46 +1.5 560,557 - yoeI HEPCGN_03250 0.48 -0.3 560,649 + +0.2 560,649 + +0.6 560,668 + +0.5 560,668 + -1.7 560,783 + plaP HEPCGN_03255 0.15 -0.2 560,825 + plaP HEPCGN_03255 0.18 -0.1 560,825 + plaP HEPCGN_03255 0.18 +0.7 560,832 - plaP HEPCGN_03255 0.19 +0.4 560,894 + plaP HEPCGN_03255 0.23 +1.1 560,999 - plaP HEPCGN_03255 0.31 +0.5 560,999 - plaP HEPCGN_03255 0.31 -2.2 561,020 - plaP HEPCGN_03255 0.32 +1.1 561,020 - plaP HEPCGN_03255 0.32 -0.4 561,052 - plaP HEPCGN_03255 0.35 -0.2 561,339 - plaP HEPCGN_03255 0.56 -0.2 561,413 + plaP HEPCGN_03255 0.61 +0.7 561,515 + plaP HEPCGN_03255 0.69 -0.1 561,515 + plaP HEPCGN_03255 0.69 +0.9 561,516 - plaP HEPCGN_03255 0.69 +1.7 561,564 + plaP HEPCGN_03255 0.72 +0.4 561,564 + plaP HEPCGN_03255 0.72 -0.1 561,565 - plaP HEPCGN_03255 0.73 +0.1 561,595 + plaP HEPCGN_03255 0.75 +0.1 561,595 + plaP HEPCGN_03255 0.75 +0.4 561,921 - +0.1 561,973 + -0.6 562,017 + -0.5 562,020 + +0.8 562,092 - -1.1 562,115 + -2.5 562,215 + -2.0 562,216 - +0.5 562,216 - +0.1 562,315 - yeeE HEPCGN_03260 0.14 +0.8 562,351 + yeeE HEPCGN_03260 0.18 -2.1 562,351 + yeeE HEPCGN_03260 0.18 +0.1 562,351 + yeeE HEPCGN_03260 0.18 -1.5 562,461 + yeeE HEPCGN_03260 0.29 -0.2 562,461 + yeeE HEPCGN_03260 0.29 -0.0 562,461 + yeeE HEPCGN_03260 0.29 +0.0 562,463 + yeeE HEPCGN_03260 0.29 +2.0 562,464 - yeeE HEPCGN_03260 0.29 +0.8 562,528 - yeeE HEPCGN_03260 0.36 +0.6 562,541 + yeeE HEPCGN_03260 0.37 -0.6 562,541 + yeeE HEPCGN_03260 0.37 +0.0 562,548 - yeeE HEPCGN_03260 0.38 -0.6 562,730 - yeeE HEPCGN_03260 0.56 +0.2 562,785 - yeeE HEPCGN_03260 0.61 +0.1 562,855 - yeeE HEPCGN_03260 0.68 -0.5 562,859 + yeeE HEPCGN_03260 0.69 -1.0
Or see this region's nucleotide sequence