Strain Fitness in Escherichia coli ECOR27 around NOLOHH_13130

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
2,539,132	+	yfhH	NOLOHH_13125	0.19	+1.2
2,539,133	-	yfhH	NOLOHH_13125	0.19	-0.9
2,539,133	-	yfhH	NOLOHH_13125	0.19	+1.3
2,539,135	-	yfhH	NOLOHH_13125	0.19	-2.0
2,539,135	-	yfhH	NOLOHH_13125	0.19	-2.8
2,539,236	-	yfhH	NOLOHH_13125	0.31	+0.8
2,539,258	-	yfhH	NOLOHH_13125	0.34	+0.6
2,539,272	-	yfhH	NOLOHH_13125	0.35	-2.9
2,539,299	-	yfhH	NOLOHH_13125	0.39	+0.7
2,539,468	+	yfhH	NOLOHH_13125	0.59	-0.2
2,539,488	+	yfhH	NOLOHH_13125	0.61	+0.8
2,539,489	-	yfhH	NOLOHH_13125	0.61	-3.5
2,539,492	+	yfhH	NOLOHH_13125	0.61	-0.3
2,539,493	-	yfhH	NOLOHH_13125	0.61	-3.1
2,539,493	-	yfhH	NOLOHH_13125	0.61	+1.5
2,539,562	-	yfhH	NOLOHH_13125	0.70	-2.8
2,539,621	+	yfhH	NOLOHH_13125	0.77	-3.7
2,539,621	+	yfhH	NOLOHH_13125	0.77	-2.7
2,539,639	+	yfhH	NOLOHH_13125	0.79	-1.7
2,539,716	-	yfhH	NOLOHH_13125	0.88	+0.6
2,539,716	-	yfhH	NOLOHH_13125	0.88	-5.2
2,539,740	-				+1.5
2,539,750	-				-1.0
2,539,808	+				+0.2
2,539,820	-				+1.3
2,539,820	-				-3.8
2,539,859	-				-0.1
2,539,859	-				+0.5
2,539,884	+				+0.5
2,539,966	+				-4.6
2,539,966	+				+0.7
2,539,967	-				+0.3
2,539,967	-				+0.0
2,539,967	-				+1.1
2,539,973	+				-0.5
2,539,978	+				+1.0
2,539,978	+				-4.6
2,539,978	+				-1.5
2,539,979	-				-1.9
2,539,982	+				+0.9
2,539,982	+				+0.9
2,539,982	+				-1.8
2,539,982	+				+0.5
2,539,982	+				-4.8
2,539,982	+				-4.1
2,539,983	-				+1.4
2,539,983	-				+1.3
2,539,983	-				-0.1
2,539,983	-				+0.5
2,539,983	-				+0.2
2,539,983	-				-2.1
2,539,983	-				+2.0
2,539,985	+				-0.1
2,539,986	-				+0.3
2,540,022	+				-2.9
2,540,022	+				+0.4
2,540,065	+				-3.2
2,540,112	+	yfhb	NOLOHH_13130	0.13	-3.4
2,540,117	-	yfhb	NOLOHH_13130	0.14	-0.9
2,540,119	+	yfhb	NOLOHH_13130	0.14	-0.8
2,540,119	+	yfhb	NOLOHH_13130	0.14	+0.6
2,540,170	+	yfhb	NOLOHH_13130	0.22	-2.4
2,540,170	+	yfhb	NOLOHH_13130	0.22	+1.7
2,540,171	-	yfhb	NOLOHH_13130	0.22	+1.1
2,540,188	+	yfhb	NOLOHH_13130	0.25	-2.7
2,540,188	+	yfhb	NOLOHH_13130	0.25	-0.7
2,540,189	-	yfhb	NOLOHH_13130	0.25	-2.3
2,540,263	+	yfhb	NOLOHH_13130	0.37	+1.0
2,540,346	+	yfhb	NOLOHH_13130	0.50	-1.6
2,540,347	-	yfhb	NOLOHH_13130	0.50	+0.5
2,540,353	+	yfhb	NOLOHH_13130	0.51	+1.0
2,540,562	+	yfhb	NOLOHH_13130	0.84	+0.1
2,540,563	-	yfhb	NOLOHH_13130	0.84	+1.2
2,540,563	-	yfhb	NOLOHH_13130	0.84	-0.6
2,540,573	+	yfhb	NOLOHH_13130	0.86	+1.5
2,540,574	-	yfhb	NOLOHH_13130	0.86	-1.0
2,540,583	-	yfhb	NOLOHH_13130	0.87	-1.9
2,540,674	-				-0.1
2,540,684	+				-0.1
2,540,685	-				+1.7
2,540,703	-				-2.4
2,541,189	-				-0.5
2,541,283	-				+2.1
2,541,418	-	mltF	NOLOHH_13140	0.13	-4.2
2,541,443	-	mltF	NOLOHH_13140	0.14	-0.3
2,541,459	+	mltF	NOLOHH_13140	0.15	-1.9
2,541,460	-	mltF	NOLOHH_13140	0.15	+0.3
2,541,460	-	mltF	NOLOHH_13140	0.15	+0.9
2,541,507	+	mltF	NOLOHH_13140	0.18	-2.4
2,541,507	+	mltF	NOLOHH_13140	0.18	-3.9
2,541,508	-	mltF	NOLOHH_13140	0.18	+1.2
2,541,508	-	mltF	NOLOHH_13140	0.18	-3.5
2,541,508	-	mltF	NOLOHH_13140	0.18	+0.0
2,541,528	-	mltF	NOLOHH_13140	0.20	-1.3
2,541,608	-	mltF	NOLOHH_13140	0.25	+1.2
2,541,608	-	mltF	NOLOHH_13140	0.25	-2.6
2,541,608	-	mltF	NOLOHH_13140	0.25	+0.2
2,541,627	+	mltF	NOLOHH_13140	0.26	+0.3
2,541,628	-	mltF	NOLOHH_13140	0.26	-1.9
2,541,628	-	mltF	NOLOHH_13140	0.26	-3.0
2,541,628	-	mltF	NOLOHH_13140	0.26	+0.1
2,541,628	-	mltF	NOLOHH_13140	0.26	-3.4
2,541,628	-	mltF	NOLOHH_13140	0.26	+0.7