Strain Fitness in Escherichia coli ECOR27 around NOLOHH_07375

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
1,398,415	-	nepI	NOLOHH_07370	0.25	-1.4
1,398,486	-	nepI	NOLOHH_07370	0.31	+0.4
1,398,613	-	nepI	NOLOHH_07370	0.41	-0.6
1,398,774	+	nepI	NOLOHH_07370	0.54	+0.7
1,398,774	+	nepI	NOLOHH_07370	0.54	+0.3
1,398,785	+	nepI	NOLOHH_07370	0.55	+0.4
1,398,788	+	nepI	NOLOHH_07370	0.55	+1.7
1,398,788	+	nepI	NOLOHH_07370	0.55	-0.4
1,398,788	+	nepI	NOLOHH_07370	0.55	+1.5
1,398,788	+	nepI	NOLOHH_07370	0.55	-2.4
1,398,788	+	nepI	NOLOHH_07370	0.55	+1.1
1,398,788	+	nepI	NOLOHH_07370	0.55	+0.0
1,398,789	-	nepI	NOLOHH_07370	0.55	+1.1
1,398,789	-	nepI	NOLOHH_07370	0.55	+0.3
1,398,789	-	nepI	NOLOHH_07370	0.55	+1.7
1,398,789	-	nepI	NOLOHH_07370	0.55	-0.5
1,398,789	-	nepI	NOLOHH_07370	0.55	+1.1
1,398,789	-	nepI	NOLOHH_07370	0.55	+1.2
1,398,862	+	nepI	NOLOHH_07370	0.61	+1.3
1,398,862	+	nepI	NOLOHH_07370	0.61	-3.4
1,398,862	+	nepI	NOLOHH_07370	0.61	-0.4
1,398,863	-	nepI	NOLOHH_07370	0.61	-3.8
1,398,863	-	nepI	NOLOHH_07370	0.61	+1.9
1,398,863	-	nepI	NOLOHH_07370	0.61	-4.8
1,398,865	-	nepI	NOLOHH_07370	0.62	+0.7
1,398,865	-	nepI	NOLOHH_07370	0.62	+1.1
1,398,865	-	nepI	NOLOHH_07370	0.62	-2.0
1,398,877	+	nepI	NOLOHH_07370	0.62	+0.2
1,398,877	+	nepI	NOLOHH_07370	0.62	-0.5
1,398,877	+	nepI	NOLOHH_07370	0.62	+0.3
1,398,877	+	nepI	NOLOHH_07370	0.62	+0.7
1,398,877	+	nepI	NOLOHH_07370	0.62	+0.3
1,398,877	+	nepI	NOLOHH_07370	0.62	+0.6
1,398,877	+	nepI	NOLOHH_07370	0.62	-0.2
1,398,878	-	nepI	NOLOHH_07370	0.63	+1.3
1,398,878	-	nepI	NOLOHH_07370	0.63	+1.0
1,398,878	-	nepI	NOLOHH_07370	0.63	+1.6
1,398,879	+	nepI	NOLOHH_07370	0.63	-1.1
1,398,880	-	nepI	NOLOHH_07370	0.63	-1.3
1,398,880	-	nepI	NOLOHH_07370	0.63	-1.7
1,398,949	-	nepI	NOLOHH_07370	0.68	-1.7
1,398,954	+	nepI	NOLOHH_07370	0.69	-0.9
1,398,955	-	nepI	NOLOHH_07370	0.69	+0.4
1,398,978	+	nepI	NOLOHH_07370	0.71	-4.3
1,398,979	-	nepI	NOLOHH_07370	0.71	+1.3
1,399,041	-	nepI	NOLOHH_07370	0.76	-1.0
1,399,180	-	nepI	NOLOHH_07370	0.87	+0.2
1,399,180	-	nepI	NOLOHH_07370	0.87	+0.8
1,399,195	-	nepI	NOLOHH_07370	0.88	+0.2
1,399,234	+				-0.3
1,399,248	+				+0.2
1,399,248	+				-0.3
1,399,248	+				-0.1
1,399,249	-				+0.1
1,399,249	-				+1.3
1,399,367	+				+1.1
1,399,367	+				-1.8
1,399,368	-				+1.4
1,399,368	-				+1.0
1,399,368	-				-0.3
1,399,383	+				+2.3
1,399,383	+				-3.6
1,399,383	+				+1.4
1,399,384	-				+2.1
1,399,384	-				-2.5
1,399,384	-				-2.9
1,399,384	-				+0.2
1,399,384	-				-2.9
1,399,384	-				+1.6
1,399,384	-				+0.3
1,399,400	+				+1.5
1,399,400	+				-2.2
1,399,400	+				+2.0
1,399,400	+				-2.9
1,399,400	+				+3.8
1,399,401	-				-0.9
1,399,401	-				+1.0
1,399,401	-				-0.3
1,399,422	+	yicS	NOLOHH_07375	0.14	-2.5
1,399,435	+	yicS	NOLOHH_07375	0.18	+0.4
1,399,436	-	yicS	NOLOHH_07375	0.18	+2.9
1,399,436	-	yicS	NOLOHH_07375	0.18	-0.2
1,399,438	+	yicS	NOLOHH_07375	0.19	-0.7
1,399,438	+	yicS	NOLOHH_07375	0.19	+0.8
1,399,439	-	yicS	NOLOHH_07375	0.19	+0.6
1,399,466	+	yicS	NOLOHH_07375	0.29	+1.5
1,399,466	+	yicS	NOLOHH_07375	0.29	-0.8
1,399,466	+	yicS	NOLOHH_07375	0.29	-1.4
1,399,467	-	yicS	NOLOHH_07375	0.29	+1.3
1,399,467	-	yicS	NOLOHH_07375	0.29	-1.0
1,399,467	-	yicS	NOLOHH_07375	0.29	+1.3
1,399,468	+	yicS	NOLOHH_07375	0.29	+1.1
1,399,468	+	yicS	NOLOHH_07375	0.29	-0.6
1,399,468	+	yicS	NOLOHH_07375	0.29	+0.8
1,399,468	+	yicS	NOLOHH_07375	0.29	-1.9
1,399,468	+	yicS	NOLOHH_07375	0.29	+0.6
1,399,468	+	yicS	NOLOHH_07375	0.29	-2.7
1,399,469	-	yicS	NOLOHH_07375	0.30	-3.9
1,399,499	+	yicS	NOLOHH_07375	0.40	+2.6
1,399,500	-	yicS	NOLOHH_07375	0.40	-0.5
1,399,500	-	yicS	NOLOHH_07375	0.40	+0.1
1,399,500	-	yicS	NOLOHH_07375	0.40	+0.7
1,399,549	+	yicS	NOLOHH_07375	0.57	+1.3
1,399,562	+	yicS	NOLOHH_07375	0.61	-2.1
1,399,562	+	yicS	NOLOHH_07375	0.61	-2.9
1,399,566	-	yicS	NOLOHH_07375	0.63	-0.6
1,399,618	-	yicS	NOLOHH_07375	0.80	-0.8
1,399,619	+	yicS	NOLOHH_07375	0.81	-3.8
1,399,619	+	yicS	NOLOHH_07375	0.81	+0.5
1,399,620	-	yicS	NOLOHH_07375	0.81	-0.0
1,399,620	-	yicS	NOLOHH_07375	0.81	-1.1
1,399,659	-				-0.1
1,399,690	-				+0.5
1,399,713	+				-0.9
1,399,713	+				+2.4
1,399,713	+				+0.7
1,399,713	+				-2.0
1,399,714	-				-4.0
1,399,714	-				-1.3
1,399,714	-				+0.9
1,399,714	-				+0.9
1,399,719	+				+0.7
1,399,719	+				-4.0
1,399,719	+				+0.8
1,399,774	-				-3.7
1,399,790	+				+0.8
1,399,791	-				-1.3
1,399,791	-				+0.1
1,399,813	+				-1.3
1,399,865	-				+2.0
1,399,872	+				+0.1
1,399,882	+				+0.2
1,399,882	+				+2.3
1,399,919	+				+1.0
1,399,937	+				-3.1
1,399,938	-				-0.5
1,399,978	-				-2.5
1,400,012	+	nlpA	NOLOHH_07380	0.14	-3.4
1,400,012	+	nlpA	NOLOHH_07380	0.14	+0.4
1,400,012	+	nlpA	NOLOHH_07380	0.14	-2.9
1,400,012	+	nlpA	NOLOHH_07380	0.14	+1.6
1,400,013	-	nlpA	NOLOHH_07380	0.14	-0.5
1,400,013	-	nlpA	NOLOHH_07380	0.14	+0.9
1,400,069	-	nlpA	NOLOHH_07380	0.21	+2.0
1,400,069	-	nlpA	NOLOHH_07380	0.21	-0.1
1,400,069	-	nlpA	NOLOHH_07380	0.21	+0.3
1,400,184	+	nlpA	NOLOHH_07380	0.35	-1.2
1,400,184	+	nlpA	NOLOHH_07380	0.35	+0.5
1,400,185	-	nlpA	NOLOHH_07380	0.35	+2.1
1,400,202	+	nlpA	NOLOHH_07380	0.37	-4.3
1,400,224	-	nlpA	NOLOHH_07380	0.40	+0.6
1,400,224	-	nlpA	NOLOHH_07380	0.40	+1.3
1,400,340	-	nlpA	NOLOHH_07380	0.54	+1.7
1,400,360	+	nlpA	NOLOHH_07380	0.57	+0.4
1,400,360	+	nlpA	NOLOHH_07380	0.57	-1.6
1,400,360	+	nlpA	NOLOHH_07380	0.57	+1.5
1,400,361	-	nlpA	NOLOHH_07380	0.57	-1.0
1,400,361	-	nlpA	NOLOHH_07380	0.57	+0.6
1,400,361	-	nlpA	NOLOHH_07380	0.57	-3.4
1,400,364	+	nlpA	NOLOHH_07380	0.57	+0.0
1,400,364	+	nlpA	NOLOHH_07380	0.57	+1.2
1,400,365	-	nlpA	NOLOHH_07380	0.57	+1.6
1,400,390	+	nlpA	NOLOHH_07380	0.60	-0.3
1,400,390	+	nlpA	NOLOHH_07380	0.60	-0.7
1,400,406	+	nlpA	NOLOHH_07380	0.62	-0.8
1,400,407	-	nlpA	NOLOHH_07380	0.62	+2.3
1,400,407	-	nlpA	NOLOHH_07380	0.62	+1.6
1,400,409	-	nlpA	NOLOHH_07380	0.63	+0.6
1,400,492	+	nlpA	NOLOHH_07380	0.73	+1.0
1,400,512	+	nlpA	NOLOHH_07380	0.75	-0.4
1,400,512	+	nlpA	NOLOHH_07380	0.75	+1.0
1,400,512	+	nlpA	NOLOHH_07380	0.75	+1.8
1,400,512	+	nlpA	NOLOHH_07380	0.75	+1.7
1,400,513	-	nlpA	NOLOHH_07380	0.75	-0.4
1,400,513	-	nlpA	NOLOHH_07380	0.75	+0.1
1,400,513	-	nlpA	NOLOHH_07380	0.75	+1.0
1,400,513	-	nlpA	NOLOHH_07380	0.75	-0.2
1,400,552	+	nlpA	NOLOHH_07380	0.80	-0.5
1,400,553	-	nlpA	NOLOHH_07380	0.80	-1.7
1,400,556	+	nlpA	NOLOHH_07380	0.80	-4.3
1,400,578	+	nlpA	NOLOHH_07380	0.83	-1.9
1,400,611	-	nlpA	NOLOHH_07380	0.87	+0.7
1,400,611	-	nlpA	NOLOHH_07380	0.87	-3.5
1,400,648	-				+2.5
1,400,668	-				+1.4