Strain Fitness in Escherichia coli ECRC62 around BNILDI_16475

Experiment: Sodium-DL-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sodium-DL-Lactate
3,299,196	-	ydiS	BNILDI_16470	0.27	-0.1
3,299,332	-	ydiS	BNILDI_16470	0.38	+0.7
3,299,451	-	ydiS	BNILDI_16470	0.47	-0.4
3,299,528	+	ydiS	BNILDI_16470	0.53	+0.0
3,299,817	+	ydiS	BNILDI_16470	0.76	-0.1
3,299,823	-	ydiS	BNILDI_16470	0.76	-0.2
3,299,824	+	ydiS	BNILDI_16470	0.76	-0.1
3,299,825	-	ydiS	BNILDI_16470	0.76	-0.7
3,299,980	+	ydiS	BNILDI_16470	0.88	-0.1
3,300,030	+				-0.2
3,300,137	-				+0.5
3,300,137	-				+0.4
3,300,227	+				+0.4
3,300,227	+				+0.1
3,300,228	-				-3.3
3,300,228	-				+1.1
3,300,228	-				-3.8
3,300,257	+				-0.1
3,300,286	-	ydiR	BNILDI_16475	0.11	+1.0
3,300,327	+	ydiR	BNILDI_16475	0.15	-0.2
3,300,327	+	ydiR	BNILDI_16475	0.15	-0.0
3,300,327	+	ydiR	BNILDI_16475	0.15	-0.7
3,300,399	+	ydiR	BNILDI_16475	0.23	-0.3
3,300,401	+	ydiR	BNILDI_16475	0.23	-0.3
3,300,401	+	ydiR	BNILDI_16475	0.23	+0.6
3,300,401	+	ydiR	BNILDI_16475	0.23	-0.3
3,300,620	+	ydiR	BNILDI_16475	0.46	-0.4
3,300,621	-	ydiR	BNILDI_16475	0.46	+0.1
3,300,621	-	ydiR	BNILDI_16475	0.46	+0.8
3,300,621	-	ydiR	BNILDI_16475	0.46	-0.7
3,300,621	-	ydiR	BNILDI_16475	0.46	-0.1
3,300,621	-	ydiR	BNILDI_16475	0.46	-2.0
3,300,746	+	ydiR	BNILDI_16475	0.60	+1.2
3,300,747	-	ydiR	BNILDI_16475	0.60	+0.0
3,300,747	-	ydiR	BNILDI_16475	0.60	+1.4
3,300,832	+	ydiR	BNILDI_16475	0.69	+0.5
3,300,832	+	ydiR	BNILDI_16475	0.69	+0.3
3,300,993	+	ydiR	BNILDI_16475	0.86	-0.8
3,301,031	+	ydiR	BNILDI_16475	0.90	+1.1
3,301,114	+				-0.0
3,301,222	+	ydiQ	BNILDI_16480	0.10	-0.5
3,301,222	+	ydiQ	BNILDI_16480	0.10	-0.2
3,301,223	-	ydiQ	BNILDI_16480	0.10	-1.0
3,301,223	-	ydiQ	BNILDI_16480	0.10	+1.0
3,301,292	-	ydiQ	BNILDI_16480	0.19	-1.0
3,301,373	-	ydiQ	BNILDI_16480	0.30	+0.2
3,301,456	+	ydiQ	BNILDI_16480	0.41	+0.4
3,301,456	+	ydiQ	BNILDI_16480	0.41	+0.5
3,301,490	-	ydiQ	BNILDI_16480	0.45	-0.6
3,301,542	+	ydiQ	BNILDI_16480	0.52	+1.2
3,301,665	+	ydiQ	BNILDI_16480	0.68	-0.1
3,301,666	-	ydiQ	BNILDI_16480	0.68	-0.7
3,301,846	-				-0.1
3,301,846	-				+4.6
3,301,902	-				+0.8
3,302,080	+		BNILDI_16485	0.76	+0.1
3,302,080	+		BNILDI_16485	0.76	+1.1
3,302,081	-		BNILDI_16485	0.76	-1.1
3,302,084	+		BNILDI_16485	0.78	+0.3
3,302,084	+		BNILDI_16485	0.78	-0.1
3,302,097	+		BNILDI_16485	0.85	-0.1