Strain Fitness in Escherichia coli ECRC62 around BNILDI_16265

Experiment: Sodium-DL-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sodium-DL-Lactate
3,259,830	+	osmE	BNILDI_16255	0.20	-0.2
3,259,959	-	osmE	BNILDI_16255	0.58	+1.0
3,259,971	+	osmE	BNILDI_16255	0.62	+0.8
3,259,971	+	osmE	BNILDI_16255	0.62	+0.3
3,260,007	+	osmE	BNILDI_16255	0.73	-0.7
3,260,020	+	osmE	BNILDI_16255	0.76	-0.3
3,260,097	+				-0.3
3,260,097	+				-0.0
3,260,097	+				-0.3
3,260,098	-				+0.2
3,260,240	+				-0.3
3,260,243	-				+0.5
3,260,256	+				-0.4
3,260,259	+				+0.2
3,260,260	-				+0.6
3,260,272	+				-0.3
3,260,280	-				+0.0
3,260,282	-				+0.7
3,260,376	-				+0.3
3,260,417	-				+0.0
3,260,442	+	chbB	BNILDI_16260	0.14	+0.1
3,260,562	-	chbB	BNILDI_16260	0.51	-0.8
3,260,583	+	chbB	BNILDI_16260	0.58	+0.5
3,260,584	-	chbB	BNILDI_16260	0.58	-2.4
3,260,630	+	chbB	BNILDI_16260	0.72	+0.0
3,260,808	+				+0.9
3,261,031	-	chbC	BNILDI_16265	0.17	-0.1
3,261,059	+	chbC	BNILDI_16265	0.19	+1.4
3,261,059	+	chbC	BNILDI_16265	0.19	+0.2
3,261,060	-	chbC	BNILDI_16265	0.19	-0.2
3,261,195	+	chbC	BNILDI_16265	0.29	+0.5
3,261,233	+	chbC	BNILDI_16265	0.32	+1.1
3,261,234	-	chbC	BNILDI_16265	0.32	+0.7
3,261,321	+	chbC	BNILDI_16265	0.38	-0.0
3,261,371	+	chbC	BNILDI_16265	0.42	-2.9
3,261,408	+	chbC	BNILDI_16265	0.45	+0.0
3,261,511	+	chbC	BNILDI_16265	0.52	+0.9
3,261,622	+	chbC	BNILDI_16265	0.60	-1.5
3,261,623	-	chbC	BNILDI_16265	0.60	+0.5
3,261,676	-	chbC	BNILDI_16265	0.64	+3.7
3,261,706	-	chbC	BNILDI_16265	0.66	+0.3
3,261,735	-	chbC	BNILDI_16265	0.69	-0.3
3,261,929	-	chbC	BNILDI_16265	0.83	+0.6
3,261,932	-	chbC	BNILDI_16265	0.83	+0.5
3,262,002	+	chbC	BNILDI_16265	0.88	+0.2
3,262,065	-				-2.4
3,262,211	+				-0.1
3,262,211	+				-1.3
3,262,317	+	chbA	BNILDI_16270	0.30	-0.1
3,262,448	+	chbA	BNILDI_16270	0.67	-1.3
3,262,448	+	chbA	BNILDI_16270	0.67	-1.6
3,262,532	-				-0.2
3,262,711	-	chbR	BNILDI_16275	0.16	-0.6