Strain Fitness in Escherichia coli ECRC62 around BNILDI_11610

Experiment: Sodium-DL-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sodium-DL-Lactate
2,330,110	+	smpB	BNILDI_11600	0.66	+0.5
2,330,111	-	smpB	BNILDI_11600	0.66	-0.0
2,330,344	-				-0.8
2,330,348	+				+0.2
2,330,349	-				+0.2
2,330,503	-	ratA	BNILDI_11605	0.21	-2.1
2,330,901	+	rnfH	BNILDI_11610	0.10	-0.1
2,330,902	-	rnfH	BNILDI_11610	0.11	-2.7
2,331,013	+	rnfH	BNILDI_11610	0.49	+0.5
2,331,160	-				+0.4
2,331,160	-				-0.6
2,331,197	+				-2.2
2,331,224	+				+0.4
2,331,225	-				+0.0
2,331,225	-				-0.2
2,331,225	-				-0.2
2,331,225	-				+0.3
2,331,225	-				+0.2
2,331,341	+	bamE	BNILDI_11615	0.35	-0.5
2,331,341	+	bamE	BNILDI_11615	0.35	+1.0
2,331,341	+	bamE	BNILDI_11615	0.35	-0.8
2,331,342	-	bamE	BNILDI_11615	0.35	+0.4
2,331,342	-	bamE	BNILDI_11615	0.35	-0.1
2,331,351	+	bamE	BNILDI_11615	0.37	+0.5
2,331,384	+	bamE	BNILDI_11615	0.47	+0.5
2,331,455	+	bamE	BNILDI_11615	0.68	+0.3
2,331,455	+	bamE	BNILDI_11615	0.68	-1.2
2,331,526	+	bamE	BNILDI_11615	0.89	+0.1
2,331,527	-	bamE	BNILDI_11615	0.89	-0.2
2,331,530	-				-0.2
2,331,530	-				-0.1
2,331,530	-				+1.4
2,331,611	+				+0.9
2,331,611	+				+0.9
2,331,611	+				+1.7
2,331,614	+				-3.4
2,331,615	-				-0.4
2,331,615	-				+0.1
2,331,625	+				-2.1
2,331,628	+				-0.3
2,331,628	+				-0.1
2,331,629	-				+0.7
2,331,646	-				-0.6
2,331,685	+				-0.2
2,331,685	+				-0.3
2,331,686	-				-1.3
2,331,686	-				-1.6
2,331,748	+				+0.4
2,331,748	+				-1.1
2,331,751	+				-2.3
2,331,751	+				+0.4
2,331,751	+				-1.1
2,331,752	-				-0.5
2,331,808	+				-0.3
2,331,986	+	recN	BNILDI_11620	0.16	+0.1
2,331,986	+	recN	BNILDI_11620	0.16	+0.7
2,332,027	+	recN	BNILDI_11620	0.19	+0.4
2,332,096	+	recN	BNILDI_11620	0.23	-0.0
2,332,097	-	recN	BNILDI_11620	0.23	-0.4