Strain Fitness in Escherichia coli ECRC62 around BNILDI_08950

Experiment: Sodium-DL-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sodium-DL-Lactate
1,790,374	-	yadL	BNILDI_08940	0.47	+0.2
1,790,496	-	yadL	BNILDI_08940	0.67	+0.7
1,790,550	+	yadL	BNILDI_08940	0.76	+0.1
1,790,562	+	yadL	BNILDI_08940	0.78	-1.4
1,790,580	+	yadL	BNILDI_08940	0.81	-0.0
1,790,713	+				-3.3
1,790,838	+	fimA	BNILDI_08945	0.23	-0.8
1,790,855	+	fimA	BNILDI_08945	0.26	+0.2
1,790,952	-	fimA	BNILDI_08945	0.43	-0.6
1,790,952	-	fimA	BNILDI_08945	0.43	+0.4
1,790,958	-	fimA	BNILDI_08945	0.44	-1.1
1,790,958	-	fimA	BNILDI_08945	0.44	+0.6
1,791,113	+	fimA	BNILDI_08945	0.71	-1.0
1,791,192	+	fimA	BNILDI_08945	0.85	+0.6
1,791,197	+	fimA	BNILDI_08945	0.86	+0.3
1,791,290	-				-0.1
1,791,498	-				+0.7
1,791,627	+	htrE	BNILDI_08950	0.13	-0.0
1,791,627	+	htrE	BNILDI_08950	0.13	+0.1
1,791,732	+	htrE	BNILDI_08950	0.17	-0.3
1,791,733	-	htrE	BNILDI_08950	0.17	+0.3
1,791,733	-	htrE	BNILDI_08950	0.17	-1.3
1,791,733	-	htrE	BNILDI_08950	0.17	-0.8
1,791,735	+	htrE	BNILDI_08950	0.17	-0.6
1,791,807	+	htrE	BNILDI_08950	0.20	+0.3
1,791,848	-	htrE	BNILDI_08950	0.21	+0.3
1,791,938	+	htrE	BNILDI_08950	0.25	-1.0
1,791,939	-	htrE	BNILDI_08950	0.25	+1.4
1,791,959	+	htrE	BNILDI_08950	0.26	+0.9
1,791,960	-	htrE	BNILDI_08950	0.26	+0.1
1,791,990	+	htrE	BNILDI_08950	0.27	-0.3
1,791,990	+	htrE	BNILDI_08950	0.27	-0.0
1,792,000	-	htrE	BNILDI_08950	0.27	+0.6
1,792,003	+	htrE	BNILDI_08950	0.27	+0.5
1,792,004	-	htrE	BNILDI_08950	0.27	-0.8
1,792,008	+	htrE	BNILDI_08950	0.28	+1.5
1,792,098	+	htrE	BNILDI_08950	0.31	+0.0
1,792,136	-	htrE	BNILDI_08950	0.32	-0.2
1,792,251	-	htrE	BNILDI_08950	0.37	+0.2
1,792,450	+	htrE	BNILDI_08950	0.45	+1.9
1,792,467	+	htrE	BNILDI_08950	0.45	+0.0
1,792,468	-	htrE	BNILDI_08950	0.45	-0.6
1,792,537	+	htrE	BNILDI_08950	0.48	-0.1
1,792,677	+	htrE	BNILDI_08950	0.53	+0.4
1,792,733	+	htrE	BNILDI_08950	0.55	-0.2
1,792,899	+	htrE	BNILDI_08950	0.62	+0.4
1,792,970	+	htrE	BNILDI_08950	0.65	+0.4
1,792,996	-	htrE	BNILDI_08950	0.66	-0.6
1,793,016	+	htrE	BNILDI_08950	0.66	+0.2
1,793,017	-	htrE	BNILDI_08950	0.66	-3.3
1,793,082	-	htrE	BNILDI_08950	0.69	+0.0
1,793,130	+	htrE	BNILDI_08950	0.71	+0.0
1,793,131	-	htrE	BNILDI_08950	0.71	-1.5
1,793,182	+	htrE	BNILDI_08950	0.73	+0.1
1,793,184	+	htrE	BNILDI_08950	0.73	+0.6
1,793,184	+	htrE	BNILDI_08950	0.73	+0.1
1,793,184	+	htrE	BNILDI_08950	0.73	-0.7
1,793,187	-	htrE	BNILDI_08950	0.73	-0.3
1,793,208	+	htrE	BNILDI_08950	0.74	-0.8
1,793,235	-	htrE	BNILDI_08950	0.75	+0.3
1,793,267	-	htrE	BNILDI_08950	0.76	+0.2
1,793,294	+	htrE	BNILDI_08950	0.77	-0.3
1,793,328	+	htrE	BNILDI_08950	0.78	-0.2
1,793,329	-	htrE	BNILDI_08950	0.78	-0.6
1,793,348	+	htrE	BNILDI_08950	0.79	-0.5
1,793,349	-	htrE	BNILDI_08950	0.79	-0.5
1,793,399	+	htrE	BNILDI_08950	0.81	+1.4
1,793,561	-	htrE	BNILDI_08950	0.87	-1.0
1,793,684	+				-0.4
1,793,684	+				-0.1
1,793,700	-				+0.0
1,793,700	-				-1.0
1,793,713	-				-1.1
1,793,748	+				+0.3
1,793,778	+				-0.3
1,793,895	+				+0.1
1,793,913	-				-0.0
1,793,915	-				+0.9
1,793,984	+				-0.2
1,794,041	-	yadV	BNILDI_08955	0.15	+0.2
1,794,092	+	yadV	BNILDI_08955	0.22	-0.3
1,794,117	+	yadV	BNILDI_08955	0.26	+0.2
1,794,117	+	yadV	BNILDI_08955	0.26	+1.8
1,794,117	+	yadV	BNILDI_08955	0.26	-1.3
1,794,117	+	yadV	BNILDI_08955	0.26	+0.5
1,794,118	-	yadV	BNILDI_08955	0.26	+0.8
1,794,118	-	yadV	BNILDI_08955	0.26	+0.2
1,794,321	-	yadV	BNILDI_08955	0.53	+0.0
1,794,381	-	yadV	BNILDI_08955	0.61	+0.1
1,794,448	+	yadV	BNILDI_08955	0.70	-0.1
1,794,448	+	yadV	BNILDI_08955	0.70	-0.5
1,794,449	-	yadV	BNILDI_08955	0.70	-0.3
1,794,485	+	yadV	BNILDI_08955	0.75	+0.3
1,794,647	-				+0.8
1,794,668	-				+0.6