Strain Fitness in Escherichia coli ECRC62 around BNILDI_05435

Experiment: Sodium-DL-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sodium-DL-Lactate
1,072,361	+				-0.3
1,072,497	-	yiiE	BNILDI_05425	0.67	+0.0
1,072,559	+				+0.7
1,072,652	+				-0.9
1,072,653	-				-1.3
1,072,786	+				-0.2
1,072,805	-				+0.1
1,072,899	+	yiiF	BNILDI_05430	0.46	-0.4
1,072,899	+	yiiF	BNILDI_05430	0.46	+0.2
1,072,899	+	yiiF	BNILDI_05430	0.46	+0.6
1,072,900	-	yiiF	BNILDI_05430	0.47	+0.2
1,073,009	-				+0.9
1,073,184	-				-0.3
1,073,204	-				-0.0
1,073,507	+	fdhE	BNILDI_05435	0.16	+1.5
1,073,571	-	fdhE	BNILDI_05435	0.23	+0.2
1,073,617	+	fdhE	BNILDI_05435	0.28	-0.2
1,073,618	-	fdhE	BNILDI_05435	0.28	-0.4
1,073,703	+	fdhE	BNILDI_05435	0.37	+0.9
1,073,703	+	fdhE	BNILDI_05435	0.37	+0.3
1,073,704	-	fdhE	BNILDI_05435	0.37	+0.7
1,073,723	+	fdhE	BNILDI_05435	0.39	+0.6
1,073,723	+	fdhE	BNILDI_05435	0.39	-0.9
1,073,723	+	fdhE	BNILDI_05435	0.39	+0.3
1,073,812	-	fdhE	BNILDI_05435	0.49	-0.4
1,073,872	-	fdhE	BNILDI_05435	0.55	+1.0
1,073,988	+	fdhE	BNILDI_05435	0.68	-0.3
1,074,046	-	fdhE	BNILDI_05435	0.74	-0.8
1,074,188	+	fdhE	BNILDI_05435	0.89	+0.1
1,074,188	+	fdhE	BNILDI_05435	0.89	-1.2
1,074,189	-	fdhE	BNILDI_05435	0.89	+0.9
1,074,189	-	fdhE	BNILDI_05435	0.89	+0.6
1,074,419	+	fdoI	BNILDI_05440	0.21	-0.4
1,074,419	+	fdoI	BNILDI_05440	0.21	+0.2
1,074,419	+	fdoI	BNILDI_05440	0.21	-2.3
1,074,419	+	fdoI	BNILDI_05440	0.21	-0.4
1,074,441	+	fdoI	BNILDI_05440	0.25	-0.2
1,074,515	-	fdoI	BNILDI_05440	0.36	-1.4
1,074,564	-	fdoI	BNILDI_05440	0.44	-0.2
1,074,599	+	fdoI	BNILDI_05440	0.49	-0.3
1,074,599	+	fdoI	BNILDI_05440	0.49	-0.2
1,074,600	-	fdoI	BNILDI_05440	0.50	-0.0
1,074,618	+	fdoI	BNILDI_05440	0.52	+0.7
1,074,618	+	fdoI	BNILDI_05440	0.52	+0.1
1,074,619	-	fdoI	BNILDI_05440	0.53	+0.6
1,074,641	+	fdoI	BNILDI_05440	0.56	-1.0
1,074,642	-	fdoI	BNILDI_05440	0.56	-1.0
1,074,642	-	fdoI	BNILDI_05440	0.56	-2.0
1,074,647	+	fdoI	BNILDI_05440	0.57	+0.6
1,074,648	-	fdoI	BNILDI_05440	0.57	+0.6
1,074,681	+	fdoI	BNILDI_05440	0.62	+0.2
1,074,681	+	fdoI	BNILDI_05440	0.62	+0.6
1,074,732	-	fdoI	BNILDI_05440	0.70	-0.0
1,074,876	-				-1.5
1,074,952	+				+0.2
1,074,993	+				-0.6
1,075,003	+				+0.7
1,075,110	+	fdoH	BNILDI_05445	0.21	+0.1
1,075,110	+	fdoH	BNILDI_05445	0.21	-1.4
1,075,111	-	fdoH	BNILDI_05445	0.21	-1.5
1,075,143	+	fdoH	BNILDI_05445	0.25	+0.1
1,075,143	+	fdoH	BNILDI_05445	0.25	+0.4
1,075,143	+	fdoH	BNILDI_05445	0.25	-0.6
1,075,143	+	fdoH	BNILDI_05445	0.25	+1.1
1,075,144	-	fdoH	BNILDI_05445	0.25	+0.4
1,075,144	-	fdoH	BNILDI_05445	0.25	+1.1
1,075,180	-	fdoH	BNILDI_05445	0.29	-0.4