Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt NOLOHH_15355 and NOLOHH_15360 are separated by 119 nucleotides NOLOHH_15360 and NOLOHH_15365 are separated by 24 nucleotides NOLOHH_15365 and NOLOHH_15370 are separated by 447 nucleotides
NOLOHH_15355: NOLOHH_15355 - Site-specific recombinase, phage integrase family, at 3,019,752 to 3,021,110
_15355
NOLOHH_15360: NOLOHH_15360 - hypothetical protein, at 3,021,230 to 3,021,499
_15360
NOLOHH_15365: NOLOHH_15365 - hypothetical protein, at 3,021,524 to 3,022,465
_15365
NOLOHH_15370: NOLOHH_15370 - hypothetical protein, at 3,022,913 to 3,023,668
_15370
Position (kb)
3021
3022
3023 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 3020.529 kb on + strand, within NOLOHH_15355 at 3020.694 kb on + strand, within NOLOHH_15355 at 3020.694 kb on + strand, within NOLOHH_15355 at 3020.694 kb on + strand, within NOLOHH_15355 at 3020.749 kb on + strand, within NOLOHH_15355 at 3021.053 kb on + strand at 3021.053 kb on + strand at 3021.053 kb on + strand at 3021.054 kb on - strand at 3021.054 kb on - strand at 3021.193 kb on + strand at 3021.223 kb on + strand at 3021.300 kb on + strand, within NOLOHH_15360 at 3021.300 kb on + strand, within NOLOHH_15360 at 3021.300 kb on + strand, within NOLOHH_15360 at 3021.300 kb on + strand, within NOLOHH_15360 at 3021.300 kb on + strand, within NOLOHH_15360 at 3021.304 kb on + strand, within NOLOHH_15360 at 3021.310 kb on + strand, within NOLOHH_15360 at 3021.310 kb on + strand, within NOLOHH_15360 at 3021.310 kb on + strand, within NOLOHH_15360 at 3021.310 kb on + strand, within NOLOHH_15360 at 3021.310 kb on + strand, within NOLOHH_15360 at 3021.310 kb on + strand, within NOLOHH_15360 at 3021.310 kb on + strand, within NOLOHH_15360 at 3021.424 kb on + strand, within NOLOHH_15360 at 3021.424 kb on + strand, within NOLOHH_15360 at 3021.424 kb on + strand, within NOLOHH_15360 at 3021.424 kb on + strand, within NOLOHH_15360 at 3021.424 kb on + strand, within NOLOHH_15360 at 3021.490 kb on + strand at 3021.591 kb on + strand at 3021.647 kb on + strand, within NOLOHH_15365 at 3021.668 kb on + strand, within NOLOHH_15365 at 3021.709 kb on + strand, within NOLOHH_15365 at 3021.767 kb on + strand, within NOLOHH_15365 at 3021.768 kb on - strand, within NOLOHH_15365 at 3021.792 kb on + strand, within NOLOHH_15365 at 3021.792 kb on + strand, within NOLOHH_15365 at 3021.792 kb on + strand, within NOLOHH_15365 at 3021.853 kb on + strand, within NOLOHH_15365 at 3022.008 kb on + strand, within NOLOHH_15365 at 3022.015 kb on + strand, within NOLOHH_15365 at 3022.015 kb on + strand, within NOLOHH_15365 at 3022.098 kb on + strand, within NOLOHH_15365 at 3022.098 kb on + strand, within NOLOHH_15365 at 3022.098 kb on + strand, within NOLOHH_15365 at 3022.098 kb on + strand, within NOLOHH_15365 at 3022.099 kb on - strand, within NOLOHH_15365 at 3022.099 kb on - strand, within NOLOHH_15365 at 3022.100 kb on + strand, within NOLOHH_15365 at 3022.101 kb on - strand, within NOLOHH_15365 at 3022.192 kb on + strand, within NOLOHH_15365 at 3022.521 kb on - strand at 3022.523 kb on - strand at 3022.547 kb on - strand at 3022.670 kb on - strand at 3022.784 kb on - strand at 3022.790 kb on - strand at 3022.790 kb on - strand at 3022.804 kb on - strand at 3022.808 kb on - strand at 3022.808 kb on - strand at 3022.808 kb on - strand at 3022.989 kb on + strand, within NOLOHH_15370 at 3023.047 kb on + strand, within NOLOHH_15370 at 3023.047 kb on + strand, within NOLOHH_15370 at 3023.048 kb on - strand, within NOLOHH_15370 at 3023.066 kb on + strand, within NOLOHH_15370 at 3023.138 kb on + strand, within NOLOHH_15370 at 3023.138 kb on + strand, within NOLOHH_15370 at 3023.274 kb on + strand, within NOLOHH_15370 at 3023.353 kb on + strand, within NOLOHH_15370 at 3023.398 kb on + strand, within NOLOHH_15370
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 3,020,529 + NOLOHH_15355 0.57 +0.7 3,020,694 + NOLOHH_15355 0.69 -2.5 3,020,694 + NOLOHH_15355 0.69 -1.3 3,020,694 + NOLOHH_15355 0.69 +1.7 3,020,749 + NOLOHH_15355 0.73 -4.0 3,021,053 + -1.1 3,021,053 + -2.3 3,021,053 + -0.1 3,021,054 - +3.0 3,021,054 - -3.4 3,021,193 + +0.3 3,021,223 + +2.0 3,021,300 + NOLOHH_15360 0.26 -1.2 3,021,300 + NOLOHH_15360 0.26 -0.4 3,021,300 + NOLOHH_15360 0.26 -0.0 3,021,300 + NOLOHH_15360 0.26 +1.8 3,021,300 + NOLOHH_15360 0.26 +0.8 3,021,304 + NOLOHH_15360 0.27 -0.1 3,021,310 + NOLOHH_15360 0.30 +1.6 3,021,310 + NOLOHH_15360 0.30 +0.2 3,021,310 + NOLOHH_15360 0.30 +1.0 3,021,310 + NOLOHH_15360 0.30 -1.4 3,021,310 + NOLOHH_15360 0.30 -4.3 3,021,310 + NOLOHH_15360 0.30 -0.0 3,021,310 + NOLOHH_15360 0.30 +0.1 3,021,424 + NOLOHH_15360 0.72 -1.0 3,021,424 + NOLOHH_15360 0.72 -0.2 3,021,424 + NOLOHH_15360 0.72 +2.1 3,021,424 + NOLOHH_15360 0.72 -0.6 3,021,424 + NOLOHH_15360 0.72 -0.3 3,021,490 + +0.8 3,021,591 + -1.5 3,021,647 + NOLOHH_15365 0.13 +0.0 3,021,668 + NOLOHH_15365 0.15 +0.8 3,021,709 + NOLOHH_15365 0.20 -2.9 3,021,767 + NOLOHH_15365 0.26 +0.2 3,021,768 - NOLOHH_15365 0.26 -2.0 3,021,792 + NOLOHH_15365 0.28 -0.4 3,021,792 + NOLOHH_15365 0.28 +1.8 3,021,792 + NOLOHH_15365 0.28 +0.1 3,021,853 + NOLOHH_15365 0.35 -0.4 3,022,008 + NOLOHH_15365 0.51 -0.0 3,022,015 + NOLOHH_15365 0.52 -0.7 3,022,015 + NOLOHH_15365 0.52 +1.2 3,022,098 + NOLOHH_15365 0.61 +0.4 3,022,098 + NOLOHH_15365 0.61 -3.6 3,022,098 + NOLOHH_15365 0.61 -3.9 3,022,098 + NOLOHH_15365 0.61 +0.8 3,022,099 - NOLOHH_15365 0.61 -1.7 3,022,099 - NOLOHH_15365 0.61 -3.2 3,022,100 + NOLOHH_15365 0.61 -1.4 3,022,101 - NOLOHH_15365 0.61 +1.7 3,022,192 + NOLOHH_15365 0.71 +1.0 3,022,521 - -3.5 3,022,523 - +0.1 3,022,547 - +1.0 3,022,670 - -4.1 3,022,784 - -2.9 3,022,790 - +0.7 3,022,790 - -0.7 3,022,804 - -0.6 3,022,808 - +0.1 3,022,808 - +1.1 3,022,808 - -4.2 3,022,989 + NOLOHH_15370 0.10 +0.7 3,023,047 + NOLOHH_15370 0.18 -1.8 3,023,047 + NOLOHH_15370 0.18 -1.7 3,023,048 - NOLOHH_15370 0.18 -1.4 3,023,066 + NOLOHH_15370 0.20 +0.3 3,023,138 + NOLOHH_15370 0.30 +0.8 3,023,138 + NOLOHH_15370 0.30 +0.9 3,023,274 + NOLOHH_15370 0.48 +0.5 3,023,353 + NOLOHH_15370 0.58 -1.2 3,023,398 + NOLOHH_15370 0.64 +0.3
Or see this region's nucleotide sequence