Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt NOLOHH_01905 and lutC are separated by 245 nucleotides lutC and ykgF overlap by 8 nucleotides ykgF and ykgE are separated by 10 nucleotides
NOLOHH_01905: NOLOHH_01905 - Uncharacterized protein YkgH, at 284,930 to 285,595
_01905
NOLOHH_01910: lutC - lactate utilization protein C, at 285,841 to 286,536
lutC
NOLOHH_01915: ykgF - LutB/LldF family L-lactate oxidation iron-sulfur protein, at 286,529 to 287,956
ykgF
NOLOHH_01920: ykgE - Uncharacterized protein YkgE, at 287,967 to 288,686
ykgE
Position (kb) 286
287
288 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 285.629 kb on + strand at 285.697 kb on + strand at 285.801 kb on + strand at 285.833 kb on + strand at 285.834 kb on - strand at 285.864 kb on - strand at 285.945 kb on + strand, within lutC at 286.023 kb on + strand, within lutC at 286.024 kb on - strand, within lutC at 286.033 kb on - strand, within lutC at 286.033 kb on - strand, within lutC at 286.124 kb on - strand, within lutC at 286.139 kb on + strand, within lutC at 286.140 kb on - strand, within lutC at 286.140 kb on - strand, within lutC at 286.155 kb on + strand, within lutC at 286.303 kb on - strand, within lutC at 286.313 kb on - strand, within lutC at 286.365 kb on + strand, within lutC at 286.366 kb on - strand, within lutC at 286.366 kb on - strand, within lutC at 286.366 kb on - strand, within lutC at 286.366 kb on - strand, within lutC at 286.413 kb on + strand, within lutC at 286.439 kb on + strand, within lutC at 286.440 kb on - strand, within lutC at 286.440 kb on - strand, within lutC at 286.440 kb on - strand, within lutC at 286.440 kb on - strand, within lutC at 286.440 kb on - strand, within lutC at 286.565 kb on - strand at 286.574 kb on - strand at 286.628 kb on - strand at 286.667 kb on - strand at 286.727 kb on - strand, within ykgF at 286.832 kb on - strand, within ykgF at 286.892 kb on - strand, within ykgF at 286.900 kb on + strand, within ykgF at 286.952 kb on - strand, within ykgF at 286.952 kb on - strand, within ykgF at 286.952 kb on - strand, within ykgF at 286.983 kb on + strand, within ykgF at 286.996 kb on + strand, within ykgF at 286.997 kb on - strand, within ykgF at 286.997 kb on - strand, within ykgF at 286.997 kb on - strand, within ykgF at 286.997 kb on - strand, within ykgF at 287.002 kb on + strand, within ykgF at 287.002 kb on + strand, within ykgF at 287.002 kb on + strand, within ykgF at 287.003 kb on - strand, within ykgF at 287.003 kb on - strand, within ykgF at 287.003 kb on - strand, within ykgF at 287.021 kb on - strand, within ykgF at 287.021 kb on - strand, within ykgF at 287.148 kb on + strand, within ykgF at 287.149 kb on - strand, within ykgF at 287.199 kb on - strand, within ykgF at 287.199 kb on - strand, within ykgF at 287.199 kb on - strand, within ykgF at 287.199 kb on - strand, within ykgF at 287.199 kb on - strand, within ykgF at 287.199 kb on - strand, within ykgF at 287.204 kb on + strand, within ykgF at 287.205 kb on - strand, within ykgF at 287.205 kb on - strand, within ykgF at 287.205 kb on - strand, within ykgF at 287.228 kb on - strand, within ykgF at 287.261 kb on - strand, within ykgF at 287.288 kb on - strand, within ykgF at 287.339 kb on - strand, within ykgF at 287.351 kb on - strand, within ykgF at 287.354 kb on + strand, within ykgF at 287.355 kb on - strand, within ykgF at 287.434 kb on - strand, within ykgF at 287.451 kb on - strand, within ykgF at 287.479 kb on + strand, within ykgF at 287.480 kb on - strand, within ykgF at 287.480 kb on - strand, within ykgF at 287.534 kb on - strand, within ykgF at 287.751 kb on + strand, within ykgF at 287.751 kb on + strand, within ykgF at 287.752 kb on - strand, within ykgF at 287.764 kb on + strand, within ykgF at 287.783 kb on + strand, within ykgF at 287.783 kb on + strand, within ykgF at 287.784 kb on - strand, within ykgF at 287.784 kb on - strand, within ykgF at 287.927 kb on - strand at 287.936 kb on - strand at 287.961 kb on - strand at 287.961 kb on - strand at 287.961 kb on - strand at 287.961 kb on - strand at 287.963 kb on - strand at 287.963 kb on - strand at 287.994 kb on - strand at 287.994 kb on - strand at 287.994 kb on - strand at 288.027 kb on + strand at 288.072 kb on + strand, within ykgE at 288.077 kb on - strand, within ykgE at 288.179 kb on + strand, within ykgE at 288.233 kb on + strand, within ykgE at 288.233 kb on + strand, within ykgE at 288.234 kb on - strand, within ykgE at 288.234 kb on - strand, within ykgE at 288.272 kb on + strand, within ykgE at 288.315 kb on + strand, within ykgE at 288.316 kb on - strand, within ykgE at 288.316 kb on - strand, within ykgE at 288.316 kb on - strand, within ykgE at 288.316 kb on - strand, within ykgE at 288.339 kb on - strand, within ykgE at 288.344 kb on + strand, within ykgE at 288.344 kb on + strand, within ykgE at 288.345 kb on - strand, within ykgE at 288.366 kb on - strand, within ykgE at 288.419 kb on - strand, within ykgE at 288.442 kb on + strand, within ykgE at 288.443 kb on - strand, within ykgE at 288.443 kb on - strand, within ykgE at 288.467 kb on + strand, within ykgE at 288.468 kb on - strand, within ykgE at 288.535 kb on + strand, within ykgE at 288.690 kb on + strand at 288.701 kb on + strand at 288.701 kb on + strand at 288.702 kb on - strand at 288.758 kb on - strand at 288.758 kb on - strand at 288.793 kb on - strand at 288.793 kb on - strand at 288.793 kb on - strand at 288.793 kb on - strand at 288.913 kb on + strand at 288.947 kb on - strand at 288.947 kb on - strand at 288.947 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 285,629 + -1.4 285,697 + +0.9 285,801 + -2.6 285,833 + -1.2 285,834 - -1.4 285,864 - -0.3 285,945 + lutC NOLOHH_01910 0.15 -2.8 286,023 + lutC NOLOHH_01910 0.26 -1.6 286,024 - lutC NOLOHH_01910 0.26 -0.2 286,033 - lutC NOLOHH_01910 0.28 -0.6 286,033 - lutC NOLOHH_01910 0.28 +0.5 286,124 - lutC NOLOHH_01910 0.41 +1.4 286,139 + lutC NOLOHH_01910 0.43 +1.6 286,140 - lutC NOLOHH_01910 0.43 -2.3 286,140 - lutC NOLOHH_01910 0.43 +0.3 286,155 + lutC NOLOHH_01910 0.45 -1.9 286,303 - lutC NOLOHH_01910 0.66 -0.7 286,313 - lutC NOLOHH_01910 0.68 -3.9 286,365 + lutC NOLOHH_01910 0.75 +0.4 286,366 - lutC NOLOHH_01910 0.75 -0.6 286,366 - lutC NOLOHH_01910 0.75 +0.8 286,366 - lutC NOLOHH_01910 0.75 +2.1 286,366 - lutC NOLOHH_01910 0.75 +1.2 286,413 + lutC NOLOHH_01910 0.82 -1.5 286,439 + lutC NOLOHH_01910 0.86 -0.4 286,440 - lutC NOLOHH_01910 0.86 +0.9 286,440 - lutC NOLOHH_01910 0.86 +0.0 286,440 - lutC NOLOHH_01910 0.86 +0.0 286,440 - lutC NOLOHH_01910 0.86 +0.7 286,440 - lutC NOLOHH_01910 0.86 +1.2 286,565 - +0.8 286,574 - +0.5 286,628 - +0.0 286,667 - -0.3 286,727 - ykgF NOLOHH_01915 0.14 -3.3 286,832 - ykgF NOLOHH_01915 0.21 +0.0 286,892 - ykgF NOLOHH_01915 0.25 -1.3 286,900 + ykgF NOLOHH_01915 0.26 -3.0 286,952 - ykgF NOLOHH_01915 0.30 -0.2 286,952 - ykgF NOLOHH_01915 0.30 +1.1 286,952 - ykgF NOLOHH_01915 0.30 -0.2 286,983 + ykgF NOLOHH_01915 0.32 +0.6 286,996 + ykgF NOLOHH_01915 0.33 -1.2 286,997 - ykgF NOLOHH_01915 0.33 +0.2 286,997 - ykgF NOLOHH_01915 0.33 -2.9 286,997 - ykgF NOLOHH_01915 0.33 -2.0 286,997 - ykgF NOLOHH_01915 0.33 -3.0 287,002 + ykgF NOLOHH_01915 0.33 -2.9 287,002 + ykgF NOLOHH_01915 0.33 +1.2 287,002 + ykgF NOLOHH_01915 0.33 +0.9 287,003 - ykgF NOLOHH_01915 0.33 +0.3 287,003 - ykgF NOLOHH_01915 0.33 +1.7 287,003 - ykgF NOLOHH_01915 0.33 -1.7 287,021 - ykgF NOLOHH_01915 0.34 +0.4 287,021 - ykgF NOLOHH_01915 0.34 -4.1 287,148 + ykgF NOLOHH_01915 0.43 -0.0 287,149 - ykgF NOLOHH_01915 0.43 -1.1 287,199 - ykgF NOLOHH_01915 0.47 +0.7 287,199 - ykgF NOLOHH_01915 0.47 +0.4 287,199 - ykgF NOLOHH_01915 0.47 -1.0 287,199 - ykgF NOLOHH_01915 0.47 -0.6 287,199 - ykgF NOLOHH_01915 0.47 +0.8 287,199 - ykgF NOLOHH_01915 0.47 +1.3 287,204 + ykgF NOLOHH_01915 0.47 -1.7 287,205 - ykgF NOLOHH_01915 0.47 -3.2 287,205 - ykgF NOLOHH_01915 0.47 +1.3 287,205 - ykgF NOLOHH_01915 0.47 -0.2 287,228 - ykgF NOLOHH_01915 0.49 -1.4 287,261 - ykgF NOLOHH_01915 0.51 -0.2 287,288 - ykgF NOLOHH_01915 0.53 -1.7 287,339 - ykgF NOLOHH_01915 0.57 -3.6 287,351 - ykgF NOLOHH_01915 0.58 -0.1 287,354 + ykgF NOLOHH_01915 0.58 -2.7 287,355 - ykgF NOLOHH_01915 0.58 -0.3 287,434 - ykgF NOLOHH_01915 0.63 -4.3 287,451 - ykgF NOLOHH_01915 0.65 +1.0 287,479 + ykgF NOLOHH_01915 0.67 -0.6 287,480 - ykgF NOLOHH_01915 0.67 +0.3 287,480 - ykgF NOLOHH_01915 0.67 -1.1 287,534 - ykgF NOLOHH_01915 0.70 +1.1 287,751 + ykgF NOLOHH_01915 0.86 -2.0 287,751 + ykgF NOLOHH_01915 0.86 -0.9 287,752 - ykgF NOLOHH_01915 0.86 +1.1 287,764 + ykgF NOLOHH_01915 0.86 +1.7 287,783 + ykgF NOLOHH_01915 0.88 -1.2 287,783 + ykgF NOLOHH_01915 0.88 -3.6 287,784 - ykgF NOLOHH_01915 0.88 -3.6 287,784 - ykgF NOLOHH_01915 0.88 -0.3 287,927 - +0.5 287,936 - +1.5 287,961 - -0.2 287,961 - +0.6 287,961 - +2.3 287,961 - +1.3 287,963 - +1.1 287,963 - +1.1 287,994 - -0.1 287,994 - -0.0 287,994 - -3.8 288,027 + +0.1 288,072 + ykgE NOLOHH_01920 0.15 +0.7 288,077 - ykgE NOLOHH_01920 0.15 +1.6 288,179 + ykgE NOLOHH_01920 0.29 +0.6 288,233 + ykgE NOLOHH_01920 0.37 +0.9 288,233 + ykgE NOLOHH_01920 0.37 -1.3 288,234 - ykgE NOLOHH_01920 0.37 -0.2 288,234 - ykgE NOLOHH_01920 0.37 +0.2 288,272 + ykgE NOLOHH_01920 0.42 -3.5 288,315 + ykgE NOLOHH_01920 0.48 -3.0 288,316 - ykgE NOLOHH_01920 0.48 -2.1 288,316 - ykgE NOLOHH_01920 0.48 +0.9 288,316 - ykgE NOLOHH_01920 0.48 -0.5 288,316 - ykgE NOLOHH_01920 0.48 +1.1 288,339 - ykgE NOLOHH_01920 0.52 -2.8 288,344 + ykgE NOLOHH_01920 0.52 +1.0 288,344 + ykgE NOLOHH_01920 0.52 +0.7 288,345 - ykgE NOLOHH_01920 0.53 +1.8 288,366 - ykgE NOLOHH_01920 0.55 -0.4 288,419 - ykgE NOLOHH_01920 0.63 -3.0 288,442 + ykgE NOLOHH_01920 0.66 -1.6 288,443 - ykgE NOLOHH_01920 0.66 +0.2 288,443 - ykgE NOLOHH_01920 0.66 -0.7 288,467 + ykgE NOLOHH_01920 0.69 +1.4 288,468 - ykgE NOLOHH_01920 0.70 +0.5 288,535 + ykgE NOLOHH_01920 0.79 -3.6 288,690 + +0.7 288,701 + +2.6 288,701 + -1.2 288,702 - +0.8 288,758 - -0.3 288,758 - -1.0 288,793 - -3.4 288,793 - -3.0 288,793 - -4.4 288,793 - +1.6 288,913 + +0.9 288,947 - +0.2 288,947 - +1.6 288,947 - +0.9
Or see this region's nucleotide sequence