Strain Fitness in Escherichia coli ECRC100 around OKFHMN_11865

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
2,272,621	+				+1.4
2,272,739	+				-0.2
2,272,888	+	ridA	OKFHMN_11860	0.28	+0.9
2,272,889	-	ridA	OKFHMN_11860	0.28	+0.2
2,272,952	+	ridA	OKFHMN_11860	0.44	+0.2
2,273,072	-	ridA	OKFHMN_11860	0.74	+0.6
2,273,088	+	ridA	OKFHMN_11860	0.78	+0.2
2,273,114	+	ridA	OKFHMN_11860	0.85	-1.7
2,273,115	-	ridA	OKFHMN_11860	0.85	-0.2
2,273,145	-				+0.2
2,273,172	+				-0.7
2,273,179	+				-1.4
2,273,179	+				-1.0
2,273,213	+				-1.0
2,273,426	+				+0.2
2,273,455	-				-4.6
2,273,455	-				-1.4
2,273,606	+				-2.6
2,273,606	+				-3.9
2,273,607	-				-5.1
2,273,609	-				-5.5
2,273,620	-				+0.1
2,273,620	-				-1.6
2,273,641	-				-4.8
2,273,830	-	pyrB	OKFHMN_11865	0.25	-5.7
2,273,865	+	pyrB	OKFHMN_11865	0.29	+0.3
2,273,887	+	pyrB	OKFHMN_11865	0.31	-4.7
2,273,888	-	pyrB	OKFHMN_11865	0.32	-2.5
2,273,960	+	pyrB	OKFHMN_11865	0.39	-2.8
2,274,149	-	pyrB	OKFHMN_11865	0.59	-2.9
2,274,185	-	pyrB	OKFHMN_11865	0.63	-1.8
2,274,185	-	pyrB	OKFHMN_11865	0.63	-4.6
2,274,185	-	pyrB	OKFHMN_11865	0.63	-5.5
2,274,448	+				-2.9
2,274,521	+				+4.8
2,274,526	+				-0.1
2,274,527	-				-2.5
2,274,536	+				-0.3
2,274,537	-				+0.1
2,274,555	+				+1.0
2,274,573	+				+0.5
2,274,574	-				-0.3
2,274,591	-	pyrI	OKFHMN_11870	0.11	-0.9
2,274,601	-	pyrI	OKFHMN_11870	0.13	-0.0
2,274,622	-	pyrI	OKFHMN_11870	0.18	-0.3
2,274,622	-	pyrI	OKFHMN_11870	0.18	+0.6
2,274,769	+	pyrI	OKFHMN_11870	0.49	+0.3
2,274,769	+	pyrI	OKFHMN_11870	0.49	+0.3
2,274,769	+	pyrI	OKFHMN_11870	0.49	+0.4
2,274,769	+	pyrI	OKFHMN_11870	0.49	+1.4
2,274,805	+	pyrI	OKFHMN_11870	0.57	+0.9
2,274,805	+	pyrI	OKFHMN_11870	0.57	-0.1
2,274,805	+	pyrI	OKFHMN_11870	0.57	-0.4
2,274,805	+	pyrI	OKFHMN_11870	0.57	-0.1
2,274,805	+	pyrI	OKFHMN_11870	0.57	+0.2
2,274,819	+	pyrI	OKFHMN_11870	0.60	+0.3
2,274,882	+	pyrI	OKFHMN_11870	0.74	+0.7
2,275,000	+				-1.1
2,275,001	-				-2.9
2,275,017	-				+0.3
2,275,086	+				-0.3
2,275,150	-	ridA	OKFHMN_11875	0.19	+0.1
2,275,150	-	ridA	OKFHMN_11875	0.19	+0.3
2,275,150	-	ridA	OKFHMN_11875	0.19	-1.5