Strain Fitness in Pseudomonas lactucae CFBP13502 around GEMAOFIL_03470

Experiment: Seed; RBT.2.2.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Seed; RBT.2.2.5
3,845,302	-				-0.3
3,845,302	-				-0.1
3,845,302	-				+0.1
3,845,304	+				+0.6
3,845,304	+				-1.1
3,845,305	-				+0.7
3,845,338	+				-1.3
3,845,338	+				-0.4
3,845,347	+				+0.2
3,845,348	-				-0.2
3,845,384	+				-0.4
3,845,385	-				+0.6
3,845,385	-				-0.1
3,845,434	-				-0.7
3,845,440	+				+1.4
3,845,441	-				-0.4
3,845,441	-				-0.2
3,845,622	+				-0.8
3,845,642	-				+0.8
3,845,683	-				-0.7
3,845,896	-		GEMAOFIL_03469	0.36	-0.1
3,846,125	-		GEMAOFIL_03469	0.83	-0.0
3,846,125	-		GEMAOFIL_03469	0.83	+0.5
3,846,125	-		GEMAOFIL_03469	0.83	+0.2
3,846,139	+		GEMAOFIL_03469	0.85	+0.1
3,846,140	-		GEMAOFIL_03469	0.86	-0.2
3,846,145	+		GEMAOFIL_03469	0.87	+0.3
3,846,146	-		GEMAOFIL_03469	0.87	-0.2
3,846,146	-		GEMAOFIL_03469	0.87	+0.1
3,846,146	-		GEMAOFIL_03469	0.87	+0.1
3,846,146	-		GEMAOFIL_03469	0.87	+0.4
3,846,286	+		GEMAOFIL_03470	0.14	+0.0
3,846,287	-		GEMAOFIL_03470	0.14	-0.2
3,846,287	-		GEMAOFIL_03470	0.14	-0.1
3,846,328	-		GEMAOFIL_03470	0.23	-0.6
3,846,568	-		GEMAOFIL_03470	0.80	+0.2
3,846,601	+		GEMAOFIL_03470	0.88	-0.0
3,846,651	+				-0.4
3,846,712	+				-1.3
3,846,712	+				-0.1
3,846,712	+				-0.7
3,846,712	+				+0.2
3,846,957	+		GEMAOFIL_03471	0.20	-0.1
3,846,961	+		GEMAOFIL_03471	0.20	+0.6
3,846,961	+		GEMAOFIL_03471	0.20	-0.3
3,846,961	+		GEMAOFIL_03471	0.20	+0.3
3,846,961	+		GEMAOFIL_03471	0.20	-0.1
3,846,961	+		GEMAOFIL_03471	0.20	-0.7
3,846,961	+		GEMAOFIL_03471	0.20	-0.2
3,846,961	+		GEMAOFIL_03471	0.20	+0.4
3,847,048	+		GEMAOFIL_03471	0.27	-0.2
3,847,049	-		GEMAOFIL_03471	0.27	+0.2
3,847,172	-		GEMAOFIL_03471	0.37	+0.4