Strain Fitness in Pseudomonas lactucae CFBP13502 around GEMAOFIL_03097

Experiment: Seed; RBT.2.2.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Seed; RBT.2.2.5
3,402,802	+				-0.8
3,402,803	-				-1.3
3,402,811	+				+1.0
3,402,812	-				+0.2
3,402,812	-				+0.1
3,402,812	-				+0.2
3,402,979	+		GEMAOFIL_03096	0.38	+0.6
3,403,162	+		GEMAOFIL_03096	0.71	+0.1
3,403,216	+		GEMAOFIL_03096	0.81	-1.6
3,403,365	+				+0.0
3,403,365	+				+0.1
3,403,530	+				-0.5
3,403,530	+				-0.8
3,403,553	-				-1.1
3,403,654	-				+0.8
3,403,661	+				-0.2
3,403,687	-				-0.2
3,403,760	+				-0.3
3,403,824	+				-0.9
3,404,028	-		GEMAOFIL_03097	0.19	+0.1
3,404,071	-		GEMAOFIL_03097	0.22	+0.1
3,404,179	-		GEMAOFIL_03097	0.29	+0.1
3,404,187	-		GEMAOFIL_03097	0.30	+0.2
3,404,226	+		GEMAOFIL_03097	0.33	-0.5
3,404,227	-		GEMAOFIL_03097	0.33	+0.6
3,404,227	-		GEMAOFIL_03097	0.33	+0.7
3,404,229	+		GEMAOFIL_03097	0.33	-0.9
3,404,229	+		GEMAOFIL_03097	0.33	-2.1
3,404,230	-		GEMAOFIL_03097	0.33	+0.5
3,404,230	-		GEMAOFIL_03097	0.33	-0.3
3,404,233	+		GEMAOFIL_03097	0.33	-0.4
3,404,234	-		GEMAOFIL_03097	0.33	-0.0
3,404,234	-		GEMAOFIL_03097	0.33	+0.7
3,404,272	-		GEMAOFIL_03097	0.36	-0.4
3,404,272	-		GEMAOFIL_03097	0.36	-0.0
3,404,272	-		GEMAOFIL_03097	0.36	+0.2
3,404,272	-		GEMAOFIL_03097	0.36	-0.6
3,404,656	-		GEMAOFIL_03097	0.63	-0.8
3,404,721	+		GEMAOFIL_03097	0.68	+0.6
3,404,721	+		GEMAOFIL_03097	0.68	+0.0
3,404,721	+		GEMAOFIL_03097	0.68	-0.3
3,404,722	-		GEMAOFIL_03097	0.68	+0.6
3,404,728	-		GEMAOFIL_03097	0.68	+0.1
3,404,752	-		GEMAOFIL_03097	0.70	+0.2
3,404,768	+		GEMAOFIL_03097	0.71	+0.6
3,404,769	-		GEMAOFIL_03097	0.71	+1.2
3,404,769	-		GEMAOFIL_03097	0.71	+0.4
3,404,769	-		GEMAOFIL_03097	0.71	+1.1
3,404,958	+		GEMAOFIL_03097	0.84	+0.4
3,404,958	+		GEMAOFIL_03097	0.84	-0.1
3,404,958	+		GEMAOFIL_03097	0.84	-0.2
3,404,959	-		GEMAOFIL_03097	0.85	+0.3
3,404,959	-		GEMAOFIL_03097	0.85	-0.6
3,404,959	-		GEMAOFIL_03097	0.85	+0.6
3,404,959	-		GEMAOFIL_03097	0.85	-0.2
3,404,959	-		GEMAOFIL_03097	0.85	-0.2
3,405,357	+		GEMAOFIL_03098	0.19	+0.3
3,405,438	+		GEMAOFIL_03098	0.27	+0.9
3,405,488	+		GEMAOFIL_03098	0.32	+0.3
3,405,727	-		GEMAOFIL_03098	0.58	-1.1
3,405,783	+		GEMAOFIL_03098	0.63	-0.9
3,405,939	-		GEMAOFIL_03098	0.80	-0.3
3,405,963	+		GEMAOFIL_03098	0.82	-0.5
3,405,964	-		GEMAOFIL_03098	0.82	+0.1
3,406,114	-				-1.4
3,406,128	+				+0.4
3,406,129	-				-0.3