Strain Fitness in Pseudomonas lactucae CFBP13502 around GEMAOFIL_02464

Experiment: Seed; RBT.2.2.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Seed; RBT.2.2.5
2,696,231	+		GEMAOFIL_02463	0.34	+0.4
2,696,470	-		GEMAOFIL_02463	0.51	-0.1
2,696,470	-		GEMAOFIL_02463	0.51	-1.4
2,696,618	+		GEMAOFIL_02463	0.62	+0.3
2,696,865	+		GEMAOFIL_02463	0.80	-0.8
2,696,865	+		GEMAOFIL_02463	0.80	-1.0
2,696,866	-		GEMAOFIL_02463	0.80	-0.1
2,696,866	-		GEMAOFIL_02463	0.80	+0.2
2,696,887	-		GEMAOFIL_02463	0.81	-0.7
2,696,973	-		GEMAOFIL_02463	0.87	-0.9
2,696,996	+		GEMAOFIL_02463	0.89	+0.7
2,696,997	-		GEMAOFIL_02463	0.89	+0.6
2,697,007	-		GEMAOFIL_02463	0.90	+0.3
2,697,007	-		GEMAOFIL_02463	0.90	-0.6
2,697,007	-		GEMAOFIL_02463	0.90	+0.1
2,697,084	+				+0.1
2,697,084	+				-1.5
2,697,087	+				-0.7
2,697,201	+		GEMAOFIL_02464	0.11	+0.8
2,697,201	+		GEMAOFIL_02464	0.11	+0.0
2,697,201	+		GEMAOFIL_02464	0.11	-0.3
2,697,202	-		GEMAOFIL_02464	0.11	-0.5
2,697,202	-		GEMAOFIL_02464	0.11	-0.4
2,697,229	+		GEMAOFIL_02464	0.16	+0.0
2,697,360	-		GEMAOFIL_02464	0.39	-0.1
2,697,423	+		GEMAOFIL_02464	0.50	+1.1
2,697,424	-		GEMAOFIL_02464	0.50	-0.4