Strain Fitness in Pseudomonas lactucae CFBP13502 around GEMAOFIL_02002

Experiment: Seed; RBT.2.2.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Seed; RBT.2.2.5
2,203,740	-		GEMAOFIL_02001	0.13	+0.0
2,203,785	-		GEMAOFIL_02001	0.18	+0.1
2,203,793	+		GEMAOFIL_02001	0.19	-0.2
2,203,793	+		GEMAOFIL_02001	0.19	-0.5
2,203,794	-		GEMAOFIL_02001	0.20	+1.0
2,203,794	-		GEMAOFIL_02001	0.20	-1.4
2,203,794	-		GEMAOFIL_02001	0.20	-0.5
2,203,794	-		GEMAOFIL_02001	0.20	-0.7
2,203,794	-		GEMAOFIL_02001	0.20	-0.8
2,203,794	-		GEMAOFIL_02001	0.20	-0.7
2,203,847	+		GEMAOFIL_02001	0.26	+0.0
2,203,848	-		GEMAOFIL_02001	0.26	+0.0
2,203,862	+		GEMAOFIL_02001	0.28	+0.3
2,203,863	-		GEMAOFIL_02001	0.28	+0.4
2,203,863	-		GEMAOFIL_02001	0.28	+0.6
2,203,863	-		GEMAOFIL_02001	0.28	+0.2
2,203,863	-		GEMAOFIL_02001	0.28	+0.3
2,204,396	+				+0.6
2,204,397	-				+0.0
2,204,397	-				+0.1
2,204,541	+				-0.3
2,204,542	-				+0.0
2,204,542	-				-0.3
2,204,545	+				+0.2
2,204,546	-				+0.2
2,204,546	-				-0.6
2,204,714	-		GEMAOFIL_02002	0.20	-0.8
2,204,714	-		GEMAOFIL_02002	0.20	+0.2
2,204,714	-		GEMAOFIL_02002	0.20	-0.6
2,204,841	-		GEMAOFIL_02002	0.31	+0.6
2,204,937	-		GEMAOFIL_02002	0.39	-1.2
2,205,074	-		GEMAOFIL_02002	0.50	-0.8
2,205,074	-		GEMAOFIL_02002	0.50	-0.6
2,205,154	-		GEMAOFIL_02002	0.57	-1.4
2,205,176	-		GEMAOFIL_02002	0.59	+0.1
2,205,185	-		GEMAOFIL_02002	0.59	-0.8
2,205,358	+		GEMAOFIL_02002	0.74	+0.2
2,205,406	+		GEMAOFIL_02002	0.78	+0.3
2,205,406	+		GEMAOFIL_02002	0.78	-0.0
2,205,406	+		GEMAOFIL_02002	0.78	-0.6
2,205,406	+		GEMAOFIL_02002	0.78	-0.1
2,205,407	-		GEMAOFIL_02002	0.78	-0.9
2,205,619	+				+0.1
2,205,772	+				-0.1
2,205,775	+				-0.4
2,205,783	+				+0.6
2,205,783	+				-0.2
2,205,791	+				-1.3
2,205,791	+				+0.7
2,205,823	-				-0.5
2,205,826	-				-0.8
2,205,826	-				-0.4
2,205,826	-				-0.2
2,205,840	-				-0.1
2,205,840	-				+0.6
2,205,843	+				+1.5
2,205,950	+		GEMAOFIL_02003	0.12	-0.1
2,205,977	+		GEMAOFIL_02003	0.14	-0.6
2,206,174	-		GEMAOFIL_02003	0.29	-0.5
2,206,179	+		GEMAOFIL_02003	0.30	+0.2
2,206,311	+		GEMAOFIL_02003	0.40	-1.1
2,206,311	+		GEMAOFIL_02003	0.40	-0.5
2,206,311	+		GEMAOFIL_02003	0.40	-0.1
2,206,311	+		GEMAOFIL_02003	0.40	-0.1
2,206,312	-		GEMAOFIL_02003	0.40	+0.7
2,206,346	+		GEMAOFIL_02003	0.42	-0.5
2,206,347	-		GEMAOFIL_02003	0.42	-0.5
2,206,443	+		GEMAOFIL_02003	0.50	+1.1
2,206,443	+		GEMAOFIL_02003	0.50	-0.4
2,206,444	-		GEMAOFIL_02003	0.50	+0.3
2,206,444	-		GEMAOFIL_02003	0.50	+0.2
2,206,444	-		GEMAOFIL_02003	0.50	-0.2
2,206,444	-		GEMAOFIL_02003	0.50	+1.4
2,206,567	-		GEMAOFIL_02003	0.59	-0.4
2,206,669	-		GEMAOFIL_02003	0.67	-1.9