Strain Fitness in Erwinia amylovora T8 around OLJFJH_10615

Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-2
2,196,842	+		OLJFJH_10610	0.76	-0.9
2,196,843	-		OLJFJH_10610	0.76	-0.6
2,196,843	-		OLJFJH_10610	0.76	-0.9
2,196,843	-		OLJFJH_10610	0.76	+1.5
2,196,843	-		OLJFJH_10610	0.76	-0.2
2,196,843	-		OLJFJH_10610	0.76	+0.0
2,196,843	-		OLJFJH_10610	0.76	+0.1
2,196,998	+				-0.5
2,197,006	+				-0.1
2,197,006	+				-0.5
2,197,081	-				+0.2
2,197,287	-		OLJFJH_10615	0.18	-0.1
2,197,287	-		OLJFJH_10615	0.18	+1.0
2,197,295	-		OLJFJH_10615	0.18	-0.6
2,197,336	+		OLJFJH_10615	0.21	+0.1
2,197,337	-		OLJFJH_10615	0.21	-0.4
2,197,359	+		OLJFJH_10615	0.22	+0.4
2,197,506	-		OLJFJH_10615	0.33	-0.3
2,197,620	+		OLJFJH_10615	0.40	+0.1
2,197,621	-		OLJFJH_10615	0.40	+2.6
2,197,672	+		OLJFJH_10615	0.44	-0.0
2,197,672	+		OLJFJH_10615	0.44	+0.9
2,197,672	+		OLJFJH_10615	0.44	+1.0
2,197,672	+		OLJFJH_10615	0.44	+0.9
2,197,672	+		OLJFJH_10615	0.44	-0.6
2,197,672	+		OLJFJH_10615	0.44	+0.7
2,197,673	-		OLJFJH_10615	0.44	+1.2
2,197,673	-		OLJFJH_10615	0.44	-0.8
2,197,673	-		OLJFJH_10615	0.44	-0.9
2,197,673	-		OLJFJH_10615	0.44	+0.7
2,197,673	-		OLJFJH_10615	0.44	-0.1
2,197,673	-		OLJFJH_10615	0.44	-1.9
2,197,673	-		OLJFJH_10615	0.44	+0.3
2,197,673	-		OLJFJH_10615	0.44	+0.2
2,197,673	-		OLJFJH_10615	0.44	+0.2
2,197,673	-		OLJFJH_10615	0.44	-0.3
2,197,673	-		OLJFJH_10615	0.44	-0.5
2,197,784	+		OLJFJH_10615	0.51	+0.9
2,198,155	-		OLJFJH_10615	0.77	+0.2
2,198,155	-		OLJFJH_10615	0.77	-0.2
2,198,155	-		OLJFJH_10615	0.77	+1.1
2,198,184	+		OLJFJH_10615	0.79	+1.1
2,198,329	+		OLJFJH_10615	0.89	-0.2
2,198,329	+		OLJFJH_10615	0.89	+2.1
2,198,370	-				-0.5
2,198,431	-				-0.1
2,198,495	+				-0.2
2,198,496	-				-0.1
2,198,496	-				+0.8
2,198,496	-				+0.3
2,198,580	-				-0.4
2,198,580	-				-1.1
2,198,622	+				+0.2
2,198,623	-				+2.3
2,198,623	-				-0.9
2,198,623	-				-0.2
2,198,886	+				-0.5
2,198,887	-				+0.2
2,198,917	+				-0.8
2,198,918	-				+0.3
2,198,927	+				-0.7
2,198,949	+				+0.2
2,198,949	+				-0.3
2,198,949	+				-0.6
2,199,007	+		OLJFJH_10620	0.13	+0.9
2,199,042	-		OLJFJH_10620	0.15	+0.1
2,199,042	-		OLJFJH_10620	0.15	-0.2
2,199,070	+		OLJFJH_10620	0.17	+0.8
2,199,070	+		OLJFJH_10620	0.17	-0.4
2,199,071	-		OLJFJH_10620	0.17	+0.3
2,199,071	-		OLJFJH_10620	0.17	-0.3
2,199,102	-		OLJFJH_10620	0.19	-0.1
2,199,316	-		OLJFJH_10620	0.32	+0.3
2,199,316	-		OLJFJH_10620	0.32	+0.2
2,199,316	-		OLJFJH_10620	0.32	-2.9
2,199,333	+		OLJFJH_10620	0.33	-0.2
2,199,350	+		OLJFJH_10620	0.35	-1.0
2,199,351	-		OLJFJH_10620	0.35	-0.0
2,199,351	-		OLJFJH_10620	0.35	-0.5
2,199,351	-		OLJFJH_10620	0.35	+0.4
2,199,433	-		OLJFJH_10620	0.40	+0.5
2,199,441	+		OLJFJH_10620	0.40	-0.2