Strain Fitness in Escherichia coli ECOR38 around HEPCGN_06860

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
105,946	+	pdeB	HEPCGN_06845	0.86	-0.1
105,974	-	pdeB	HEPCGN_06845	0.88	-0.5
106,069	-				-0.3
106,088	+				-1.0
106,234	+				+0.8
106,235	-				-0.7
106,235	-				+0.3
106,235	-				+0.7
106,339	+	ybaA	HEPCGN_06850	0.38	+0.0
106,352	+	ybaA	HEPCGN_06850	0.42	-0.2
106,392	-	ybaA	HEPCGN_06850	0.53	+0.2
106,471	-	ybaA	HEPCGN_06850	0.76	-2.3
106,549	+				-0.2
106,550	-				-0.1
106,550	-				+0.9
106,563	+				-0.8
106,906	-				+0.1
106,998	+	atl	HEPCGN_06860	0.20	+1.0
106,998	+	atl	HEPCGN_06860	0.20	+0.4
106,999	-	atl	HEPCGN_06860	0.21	+0.8
107,010	+	atl	HEPCGN_06860	0.24	-0.7
107,010	+	atl	HEPCGN_06860	0.24	+0.5
107,011	-	atl	HEPCGN_06860	0.24	+0.6
107,156	-	atl	HEPCGN_06860	0.71	+0.2
107,241	+				-0.5
107,242	-				-0.3
107,242	-				-1.4
107,242	-				-0.6
107,244	+				-2.8
107,268	+				-0.3
107,282	-				-0.2
107,282	-				-0.1
107,459	+	ybaY	HEPCGN_06865	0.32	-0.0
107,460	-	ybaY	HEPCGN_06865	0.32	-0.0
107,464	-	ybaY	HEPCGN_06865	0.33	+0.4
107,567	+	ybaY	HEPCGN_06865	0.51	-0.9
107,568	-	ybaY	HEPCGN_06865	0.51	-0.4
107,742	-	ybaY	HEPCGN_06865	0.81	-0.6
107,748	-	ybaY	HEPCGN_06865	0.82	-0.1
107,917	-				-0.2
107,971	+				-2.8
107,972	-				+0.1
108,017	+				-0.2
108,053	+				+1.5
108,064	+				+0.1
108,065	-				-0.1
108,066	+				-0.6
108,102	-				+1.8
108,199	+	tesB	HEPCGN_06870	0.15	-0.4
108,199	+	tesB	HEPCGN_06870	0.15	-0.7
108,199	+	tesB	HEPCGN_06870	0.15	-0.9
108,200	-	tesB	HEPCGN_06870	0.15	-0.8