Strain Fitness in Escherichia coli ECOR27 around NOLOHH_16365

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
3,221,021	+				+1.1
3,221,047	+				-1.3
3,221,201	-	yedK	NOLOHH_16355	0.29	-2.8
3,221,329	-	yedK	NOLOHH_16355	0.48	-0.7
3,221,419	+	yedK	NOLOHH_16355	0.62	-2.3
3,221,568	+	yedK	NOLOHH_16355	0.84	-1.3
3,221,706	-				-1.0
3,221,728	+				-1.2
3,221,783	-				+3.4
3,221,838	-	yedF	NOLOHH_16360	0.24	+1.1
3,221,838	-	yedF	NOLOHH_16360	0.24	-2.1
3,222,106	-				-0.1
3,222,106	-				-0.1
3,222,106	-				+0.1
3,222,106	-				-1.8
3,222,106	-				-1.5
3,222,201	+	yedE	NOLOHH_16365	0.16	+1.5
3,222,330	-	yedE	NOLOHH_16365	0.26	-2.3
3,222,342	-	yedE	NOLOHH_16365	0.27	+1.6
3,222,390	-	yedE	NOLOHH_16365	0.31	-2.3
3,222,390	-	yedE	NOLOHH_16365	0.31	-2.1
3,222,394	-	yedE	NOLOHH_16365	0.32	-0.5
3,222,472	+	yedE	NOLOHH_16365	0.38	+0.4
3,222,491	-	yedE	NOLOHH_16365	0.40	+1.7
3,222,491	-	yedE	NOLOHH_16365	0.40	-1.3
3,222,880	+	yedE	NOLOHH_16365	0.72	-0.4
3,222,908	+	yedE	NOLOHH_16365	0.74	+1.3
3,222,909	-	yedE	NOLOHH_16365	0.74	-2.1
3,223,013	-	yedE	NOLOHH_16365	0.83	+0.2
3,223,141	+				-0.2
3,223,222	+				+1.4
3,223,265	+				+2.9
3,223,265	+				+3.3
3,223,266	-				+0.4
3,223,266	-				+0.4
3,223,310	+				-1.1
3,223,677	+	yedD	NOLOHH_16370	0.66	+0.9
3,223,732	+	yedD	NOLOHH_16370	0.79	+0.2
3,223,732	+	yedD	NOLOHH_16370	0.79	+0.9
3,223,852	-				-2.0
3,223,929	-				-2.1
3,223,929	-				-0.5
3,224,103	-	amyA	NOLOHH_16375	0.17	+0.2
3,224,111	+	amyA	NOLOHH_16375	0.18	+0.3
3,224,112	-	amyA	NOLOHH_16375	0.18	+0.5
3,224,112	-	amyA	NOLOHH_16375	0.18	-2.6
3,224,145	-	amyA	NOLOHH_16375	0.20	+1.3
3,224,173	+	amyA	NOLOHH_16375	0.22	+0.3
3,224,174	-	amyA	NOLOHH_16375	0.22	-2.6
3,224,178	-	amyA	NOLOHH_16375	0.22	+1.3
3,224,185	-	amyA	NOLOHH_16375	0.23	-0.6
3,224,214	+	amyA	NOLOHH_16375	0.24	+0.0