Strain Fitness in Escherichia coli ECOR27 around NOLOHH_13835

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
2,688,058	+				-0.5
2,688,058	+				-0.5
2,688,087	+				-0.7
2,688,087	+				+0.4
2,688,088	-				+0.8
2,688,176	+	cysP	NOLOHH_13830	0.18	+0.7
2,688,220	+	cysP	NOLOHH_13830	0.23	-0.2
2,688,249	+	cysP	NOLOHH_13830	0.25	-0.1
2,688,250	-	cysP	NOLOHH_13830	0.25	-0.2
2,688,250	-	cysP	NOLOHH_13830	0.25	+0.4
2,688,251	+	cysP	NOLOHH_13830	0.26	+1.5
2,688,251	+	cysP	NOLOHH_13830	0.26	-1.8
2,688,251	+	cysP	NOLOHH_13830	0.26	-0.6
2,688,252	-	cysP	NOLOHH_13830	0.26	+0.6
2,688,268	+	cysP	NOLOHH_13830	0.27	+0.3
2,688,332	+	cysP	NOLOHH_13830	0.34	-2.7
2,688,332	+	cysP	NOLOHH_13830	0.34	+0.2
2,688,470	+	cysP	NOLOHH_13830	0.47	+0.8
2,688,470	+	cysP	NOLOHH_13830	0.47	-0.4
2,688,470	+	cysP	NOLOHH_13830	0.47	-0.5
2,688,470	+	cysP	NOLOHH_13830	0.47	+0.6
2,688,474	+	cysP	NOLOHH_13830	0.47	+0.4
2,688,474	+	cysP	NOLOHH_13830	0.47	+0.5
2,688,474	+	cysP	NOLOHH_13830	0.47	-3.4
2,688,475	-	cysP	NOLOHH_13830	0.48	-3.6
2,688,713	+	cysP	NOLOHH_13830	0.71	-0.4
2,688,804	+	cysP	NOLOHH_13830	0.80	-1.7
2,688,840	+	cysP	NOLOHH_13830	0.83	+0.1
2,688,840	+	cysP	NOLOHH_13830	0.83	-0.3
2,688,840	+	cysP	NOLOHH_13830	0.83	+0.3
2,688,840	+	cysP	NOLOHH_13830	0.83	+0.7
2,689,001	+				+0.5
2,689,045	+				+2.2
2,689,380	-	cysT	NOLOHH_13835	0.45	-2.2
2,689,418	+	cysT	NOLOHH_13835	0.49	-0.1
2,689,418	+	cysT	NOLOHH_13835	0.49	+0.3
2,689,420	+	cysT	NOLOHH_13835	0.50	+0.5
2,689,420	+	cysT	NOLOHH_13835	0.50	-0.2
2,689,420	+	cysT	NOLOHH_13835	0.50	+0.4
2,689,420	+	cysT	NOLOHH_13835	0.50	-2.3
2,689,515	-	cysT	NOLOHH_13835	0.61	+0.0
2,689,627	+	cysT	NOLOHH_13835	0.74	-0.1
2,689,653	+	cysT	NOLOHH_13835	0.77	+2.1
2,689,653	+	cysT	NOLOHH_13835	0.77	+0.3
2,689,795	+				-1.8
2,689,795	+				-0.0
2,689,796	-				-2.4
2,689,830	+				+1.8
2,689,838	+				-0.9
2,689,904	+				+0.7
2,689,904	+				-2.1
2,689,957	+	cysW	NOLOHH_13840	0.13	-0.5
2,689,957	+	cysW	NOLOHH_13840	0.13	+0.7
2,689,957	+	cysW	NOLOHH_13840	0.13	+0.8
2,689,958	-	cysW	NOLOHH_13840	0.13	-0.5
2,690,000	+	cysW	NOLOHH_13840	0.18	-0.2
2,690,141	+	cysW	NOLOHH_13840	0.34	-0.4
2,690,200	+	cysW	NOLOHH_13840	0.41	+0.8
2,690,254	-	cysW	NOLOHH_13840	0.47	+0.9
2,690,254	-	cysW	NOLOHH_13840	0.47	+0.9
2,690,254	-	cysW	NOLOHH_13840	0.47	-0.8
2,690,265	+	cysW	NOLOHH_13840	0.49	+0.4
2,690,265	+	cysW	NOLOHH_13840	0.49	+1.2
2,690,265	+	cysW	NOLOHH_13840	0.49	-2.8
2,690,348	+	cysW	NOLOHH_13840	0.58	+0.6
2,690,452	+	cysW	NOLOHH_13840	0.70	-2.5
2,690,575	+	cysW	NOLOHH_13840	0.84	+2.5
2,690,576	-	cysW	NOLOHH_13840	0.84	-0.2
2,690,629	-				-1.7
2,690,649	+				+1.0
2,690,728	+				-0.5
2,690,728	+				-3.1
2,690,728	+				-0.8
2,690,764	+				+0.2