Strain Fitness in Escherichia coli ECOR27 around NOLOHH_12930

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
2,502,545	+				+1.1
2,502,560	+				+0.5
2,502,560	+				-0.2
2,502,560	+				+0.9
2,502,560	+				+0.4
2,502,560	+				+0.2
2,502,561	-				+2.0
2,502,561	-				+0.1
2,502,562	+				-2.4
2,502,562	+				-0.2
2,502,562	+				-2.0
2,502,562	+				+0.9
2,502,562	+				-0.2
2,502,562	+				-1.1
2,502,562	+				-0.9
2,502,562	+				+1.3
2,502,562	+				+0.9
2,502,562	+				+0.7
2,502,562	+				+1.3
2,502,562	+				+0.1
2,502,562	+				-1.9
2,502,562	+				-4.2
2,502,562	+				+1.7
2,502,562	+				-1.8
2,502,562	+				-0.4
2,502,562	+				-1.2
2,502,562	+				+0.2
2,502,562	+				+0.9
2,502,562	+				+0.8
2,502,562	+				-0.6
2,502,563	-				+2.9
2,502,563	-				-2.2
2,502,563	-				-0.9
2,502,563	-				-0.9
2,502,563	-				+1.6
2,502,563	-				-3.1
2,502,563	-				-0.2
2,502,563	-				+0.0
2,502,564	+				-1.7
2,502,564	+				+0.4
2,502,565	-				+0.7
2,502,565	-				+0.8
2,502,565	-				+0.6
2,502,565	-				-0.8
2,502,565	-				-0.9
2,502,565	-				-0.1
2,502,565	-				+1.1
2,502,565	-				-0.8
2,502,579	-				-2.5
2,502,624	-				-0.7
2,502,624	-				-0.7
2,502,705	-	rluD	NOLOHH_12925	0.14	+0.2
2,502,724	-	rluD	NOLOHH_12925	0.16	-0.7
2,502,840	+	rluD	NOLOHH_12925	0.28	-0.4
2,502,876	-	rluD	NOLOHH_12925	0.32	-0.9
2,502,876	-	rluD	NOLOHH_12925	0.32	+0.2
2,502,929	-	rluD	NOLOHH_12925	0.37	+0.0
2,502,929	-	rluD	NOLOHH_12925	0.37	-2.8
2,502,929	-	rluD	NOLOHH_12925	0.37	+0.3
2,502,950	+	rluD	NOLOHH_12925	0.39	-3.4
2,502,950	+	rluD	NOLOHH_12925	0.39	-1.3
2,502,950	+	rluD	NOLOHH_12925	0.39	-4.1
2,502,950	+	rluD	NOLOHH_12925	0.39	-1.1
2,502,951	-	rluD	NOLOHH_12925	0.39	-0.8
2,502,951	-	rluD	NOLOHH_12925	0.39	-1.1
2,503,038	-	rluD	NOLOHH_12925	0.48	+0.1
2,503,098	+	rluD	NOLOHH_12925	0.54	-0.8
2,503,113	+	rluD	NOLOHH_12925	0.56	+0.0
2,503,118	+	rluD	NOLOHH_12925	0.56	-0.7
2,503,118	+	rluD	NOLOHH_12925	0.56	-3.0
2,503,119	-	rluD	NOLOHH_12925	0.56	-2.3
2,503,119	-	rluD	NOLOHH_12925	0.56	+0.8
2,503,152	+	rluD	NOLOHH_12925	0.60	+1.2
2,503,152	+	rluD	NOLOHH_12925	0.60	-2.2
2,503,152	+	rluD	NOLOHH_12925	0.60	-1.8
2,503,152	+	rluD	NOLOHH_12925	0.60	-0.3
2,503,152	+	rluD	NOLOHH_12925	0.60	-3.0
2,503,153	-	rluD	NOLOHH_12925	0.60	-1.1
2,503,260	+	rluD	NOLOHH_12925	0.71	+1.1
2,503,260	+	rluD	NOLOHH_12925	0.71	-2.1
2,503,260	+	rluD	NOLOHH_12925	0.71	-1.8
2,503,261	-	rluD	NOLOHH_12925	0.71	-0.4
2,503,261	-	rluD	NOLOHH_12925	0.71	-3.5
2,503,261	-	rluD	NOLOHH_12925	0.71	+1.4
2,503,261	-	rluD	NOLOHH_12925	0.71	+1.4
2,503,291	-	rluD	NOLOHH_12925	0.74	-2.9
2,503,322	-	rluD	NOLOHH_12925	0.77	-2.1
2,503,365	+	rluD	NOLOHH_12925	0.82	-1.5
2,503,365	+	rluD	NOLOHH_12925	0.82	-0.6
2,503,365	+	rluD	NOLOHH_12925	0.82	-3.4
2,503,365	+	rluD	NOLOHH_12925	0.82	+0.1
2,503,365	+	rluD	NOLOHH_12925	0.82	-3.0
2,503,365	+	rluD	NOLOHH_12925	0.82	-1.1
2,503,366	-	rluD	NOLOHH_12925	0.82	+0.4
2,503,366	-	rluD	NOLOHH_12925	0.82	-0.2
2,503,423	+	rluD	NOLOHH_12925	0.87	-1.4
2,503,424	-	rluD	NOLOHH_12925	0.88	-0.4
2,503,476	+				+1.3
2,503,476	+				-1.7
2,503,476	+				-0.4
2,503,476	+				-0.0
2,503,477	-				-0.4
2,503,477	-				+1.5
2,503,477	-				-0.9
2,503,477	-				+0.6
2,503,521	+				-1.7
2,503,521	+				-0.1
2,503,521	+				+0.6
2,503,521	+				+0.3
2,503,521	+				-1.4
2,503,521	+				-0.1
2,503,522	-				+2.7
2,503,522	-				+2.0
2,503,522	-				+1.6
2,503,595	+				+0.3
2,503,595	+				+1.8
2,503,596	-				-1.2
2,503,596	-				+1.8
2,503,596	-				+0.6
2,503,727	+	yfiH	NOLOHH_12930	0.25	-4.0
2,503,728	-	yfiH	NOLOHH_12930	0.25	+1.5
2,503,750	+	yfiH	NOLOHH_12930	0.28	+0.3
2,503,750	+	yfiH	NOLOHH_12930	0.28	-0.9
2,503,750	+	yfiH	NOLOHH_12930	0.28	+0.4
2,503,751	-	yfiH	NOLOHH_12930	0.29	-0.5
2,503,769	+	yfiH	NOLOHH_12930	0.31	+0.7
2,503,769	+	yfiH	NOLOHH_12930	0.31	+0.8
2,503,769	+	yfiH	NOLOHH_12930	0.31	+2.5
2,503,770	-	yfiH	NOLOHH_12930	0.31	-2.1
2,503,776	-	yfiH	NOLOHH_12930	0.32	+1.1
2,503,788	+	yfiH	NOLOHH_12930	0.34	-2.9
2,503,788	+	yfiH	NOLOHH_12930	0.34	+0.3
2,503,788	+	yfiH	NOLOHH_12930	0.34	+0.1
2,503,815	+	yfiH	NOLOHH_12930	0.37	+2.3
2,503,816	-	yfiH	NOLOHH_12930	0.37	+0.4
2,503,817	+	yfiH	NOLOHH_12930	0.38	+0.5
2,503,817	+	yfiH	NOLOHH_12930	0.38	-3.7
2,503,818	-	yfiH	NOLOHH_12930	0.38	+0.2
2,503,818	-	yfiH	NOLOHH_12930	0.38	+0.5
2,503,818	-	yfiH	NOLOHH_12930	0.38	-0.5
2,503,818	-	yfiH	NOLOHH_12930	0.38	+1.6
2,503,818	-	yfiH	NOLOHH_12930	0.38	+0.6
2,503,823	+	yfiH	NOLOHH_12930	0.38	+0.4
2,504,073	-	yfiH	NOLOHH_12930	0.73	+0.3
2,504,105	+	yfiH	NOLOHH_12930	0.77	+1.4
2,504,105	+	yfiH	NOLOHH_12930	0.77	+0.3
2,504,105	+	yfiH	NOLOHH_12930	0.77	-0.3
2,504,105	+	yfiH	NOLOHH_12930	0.77	+0.8
2,504,105	+	yfiH	NOLOHH_12930	0.77	+0.6
2,504,106	-	yfiH	NOLOHH_12930	0.77	-0.5
2,504,106	-	yfiH	NOLOHH_12930	0.77	+1.3
2,504,109	+	yfiH	NOLOHH_12930	0.77	+0.2
2,504,109	+	yfiH	NOLOHH_12930	0.77	+1.2
2,504,124	+	yfiH	NOLOHH_12930	0.80	+0.3
2,504,189	+	yfiH	NOLOHH_12930	0.88	+1.3
2,504,189	+	yfiH	NOLOHH_12930	0.88	+0.7
2,504,189	+	yfiH	NOLOHH_12930	0.88	+1.9
2,504,189	+	yfiH	NOLOHH_12930	0.88	-1.5
2,504,189	+	yfiH	NOLOHH_12930	0.88	+0.1
2,504,189	+	yfiH	NOLOHH_12930	0.88	+2.2
2,504,189	+	yfiH	NOLOHH_12930	0.88	+1.2
2,504,189	+	yfiH	NOLOHH_12930	0.88	-0.8
2,504,190	-	yfiH	NOLOHH_12930	0.89	+1.0
2,504,190	-	yfiH	NOLOHH_12930	0.89	+0.6
2,504,190	-	yfiH	NOLOHH_12930	0.89	-1.6
2,504,190	-	yfiH	NOLOHH_12930	0.89	+0.2
2,504,193	+	yfiH	NOLOHH_12930	0.89	-0.4
2,504,193	+	yfiH	NOLOHH_12930	0.89	-2.2
2,504,193	+	yfiH	NOLOHH_12930	0.89	-0.1
2,504,194	-	yfiH	NOLOHH_12930	0.89	+0.3
2,504,194	-	yfiH	NOLOHH_12930	0.89	+0.4
2,504,194	-	yfiH	NOLOHH_12930	0.89	+0.5
2,504,195	+	yfiH	NOLOHH_12930	0.89	+1.1
2,504,246	+				+0.7
2,504,269	+				+0.3
2,504,363	+				-0.8
2,504,364	-				+0.6
2,504,364	-				-0.3
2,504,402	+				+1.5
2,504,403	-				-3.1
2,504,421	-				-2.9
2,504,424	-				+0.0
2,504,503	+				-1.7
2,504,548	+				+0.7
2,504,551	+				-1.0
2,504,551	+				+0.6
2,504,566	+				-2.7
2,504,567	-				-1.1
2,504,567	-				-1.1
2,504,567	-				+0.3
2,504,591	+				+0.4
2,504,592	-				+1.1
2,504,675	+	clpB	NOLOHH_12940	0.11	+0.7
2,504,711	+	clpB	NOLOHH_12940	0.12	-0.5
2,504,718	-	clpB	NOLOHH_12940	0.12	-0.6
2,504,718	-	clpB	NOLOHH_12940	0.12	+1.1
2,504,810	+	clpB	NOLOHH_12940	0.16	-0.5
2,504,893	-	clpB	NOLOHH_12940	0.19	-2.3
2,504,894	+	clpB	NOLOHH_12940	0.19	-0.8
2,504,895	-	clpB	NOLOHH_12940	0.19	-1.1
2,504,996	+	clpB	NOLOHH_12940	0.23	-1.7
2,504,996	+	clpB	NOLOHH_12940	0.23	-0.9
2,505,035	+	clpB	NOLOHH_12940	0.25	-0.8
2,505,068	+	clpB	NOLOHH_12940	0.26	+0.8
2,505,068	+	clpB	NOLOHH_12940	0.26	+1.0
2,505,069	-	clpB	NOLOHH_12940	0.26	-3.7
2,505,069	-	clpB	NOLOHH_12940	0.26	-3.0
2,505,069	-	clpB	NOLOHH_12940	0.26	+1.4
2,505,069	-	clpB	NOLOHH_12940	0.26	-2.0
2,505,071	+	clpB	NOLOHH_12940	0.26	-2.8
2,505,125	+	clpB	NOLOHH_12940	0.28	+0.4
2,505,241	+	clpB	NOLOHH_12940	0.33	-0.5
2,505,241	+	clpB	NOLOHH_12940	0.33	+0.1
2,505,245	+	clpB	NOLOHH_12940	0.33	-2.3
2,505,245	+	clpB	NOLOHH_12940	0.33	+0.7
2,505,245	+	clpB	NOLOHH_12940	0.33	+0.3
2,505,245	+	clpB	NOLOHH_12940	0.33	+0.6
2,505,245	+	clpB	NOLOHH_12940	0.33	+0.9
2,505,246	-	clpB	NOLOHH_12940	0.33	-3.4
2,505,246	-	clpB	NOLOHH_12940	0.33	-0.8