Strain Fitness in Escherichia coli ECOR27 around NOLOHH_10020

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
1,928,225	+	yraQ	NOLOHH_10010	0.82	+0.4
1,928,226	-	yraQ	NOLOHH_10010	0.82	-0.2
1,928,226	-	yraQ	NOLOHH_10010	0.82	-0.1
1,928,313	+				-0.4
1,928,313	+				-1.4
1,928,314	-				-0.3
1,928,314	-				-1.6
1,928,314	-				+2.5
1,928,345	+				+0.0
1,928,346	-				+1.1
1,928,459	+				+0.5
1,928,459	+				+0.3
1,928,460	-				+0.4
1,928,514	+				-0.2
1,928,514	+				-0.0
1,928,527	+				+0.1
1,928,527	+				+1.0
1,928,527	+				-1.1
1,928,532	-				-1.1
1,928,535	-				-2.3
1,928,541	-				-0.2
1,928,562	+				+0.6
1,928,563	-				+0.0
1,928,779	+	dolP	NOLOHH_10015	0.44	+0.4
1,928,779	+	dolP	NOLOHH_10015	0.44	-0.7
1,928,779	+	dolP	NOLOHH_10015	0.44	-1.5
1,928,779	+	dolP	NOLOHH_10015	0.44	-0.3
1,928,779	+	dolP	NOLOHH_10015	0.44	+0.0
1,928,779	+	dolP	NOLOHH_10015	0.44	-2.7
1,928,780	-	dolP	NOLOHH_10015	0.44	-0.1
1,928,780	-	dolP	NOLOHH_10015	0.44	+1.0
1,928,780	-	dolP	NOLOHH_10015	0.44	-0.1
1,928,780	-	dolP	NOLOHH_10015	0.44	+0.6
1,928,800	-	dolP	NOLOHH_10015	0.48	-0.6
1,928,879	-	dolP	NOLOHH_10015	0.61	+1.6
1,928,891	+	dolP	NOLOHH_10015	0.63	+0.7
1,928,891	+	dolP	NOLOHH_10015	0.63	-1.2
1,928,892	-	dolP	NOLOHH_10015	0.64	-0.5
1,928,910	-	dolP	NOLOHH_10015	0.67	+0.3
1,928,958	-	dolP	NOLOHH_10015	0.75	+0.5
1,929,072	-				-3.3
1,929,072	-				-2.6
1,929,104	-				+1.8
1,929,104	-				+0.6
1,929,104	-				-0.4
1,929,113	-				+1.1
1,929,177	-	diaA	NOLOHH_10020	0.11	-3.1
1,929,177	-	diaA	NOLOHH_10020	0.11	-0.0
1,929,177	-	diaA	NOLOHH_10020	0.11	+0.9
1,929,201	-	diaA	NOLOHH_10020	0.15	+0.0
1,929,294	-	diaA	NOLOHH_10020	0.31	+0.7
1,929,366	+	diaA	NOLOHH_10020	0.43	-1.7
1,929,366	+	diaA	NOLOHH_10020	0.43	-0.9
1,929,366	+	diaA	NOLOHH_10020	0.43	+1.7
1,929,366	+	diaA	NOLOHH_10020	0.43	+1.8
1,929,366	+	diaA	NOLOHH_10020	0.43	-0.5
1,929,366	+	diaA	NOLOHH_10020	0.43	-1.2
1,929,366	+	diaA	NOLOHH_10020	0.43	-1.6
1,929,366	+	diaA	NOLOHH_10020	0.43	+0.2
1,929,367	-	diaA	NOLOHH_10020	0.43	-1.3
1,929,367	-	diaA	NOLOHH_10020	0.43	-0.9
1,929,367	-	diaA	NOLOHH_10020	0.43	+0.4
1,929,367	-	diaA	NOLOHH_10020	0.43	-0.0
1,929,367	-	diaA	NOLOHH_10020	0.43	+1.4
1,929,367	-	diaA	NOLOHH_10020	0.43	-0.2
1,929,367	-	diaA	NOLOHH_10020	0.43	+0.6
1,929,367	-	diaA	NOLOHH_10020	0.43	+0.8
1,929,367	-	diaA	NOLOHH_10020	0.43	+0.5
1,929,367	-	diaA	NOLOHH_10020	0.43	+0.8
1,929,367	-	diaA	NOLOHH_10020	0.43	-3.8
1,929,367	-	diaA	NOLOHH_10020	0.43	+0.3
1,929,367	-	diaA	NOLOHH_10020	0.43	-0.5
1,929,367	-	diaA	NOLOHH_10020	0.43	-3.1
1,929,367	-	diaA	NOLOHH_10020	0.43	+1.4
1,929,367	-	diaA	NOLOHH_10020	0.43	+1.3
1,929,367	-	diaA	NOLOHH_10020	0.43	-1.0
1,929,406	+	diaA	NOLOHH_10020	0.50	-2.1
1,929,406	+	diaA	NOLOHH_10020	0.50	-1.4
1,929,406	+	diaA	NOLOHH_10020	0.50	-0.7
1,929,407	-	diaA	NOLOHH_10020	0.50	-0.2
1,929,420	+	diaA	NOLOHH_10020	0.52	-0.8
1,929,421	-	diaA	NOLOHH_10020	0.52	+2.2
1,929,421	-	diaA	NOLOHH_10020	0.52	+1.2
1,929,421	-	diaA	NOLOHH_10020	0.52	+0.4
1,929,421	-	diaA	NOLOHH_10020	0.52	+0.3
1,929,421	-	diaA	NOLOHH_10020	0.52	+1.3
1,929,455	+	diaA	NOLOHH_10020	0.58	-0.1
1,929,462	-	diaA	NOLOHH_10020	0.59	-2.1
1,929,465	+	diaA	NOLOHH_10020	0.60	-0.1
1,929,466	-	diaA	NOLOHH_10020	0.60	-2.5
1,929,466	-	diaA	NOLOHH_10020	0.60	+1.1
1,929,480	+	diaA	NOLOHH_10020	0.62	+1.0
1,929,481	-	diaA	NOLOHH_10020	0.63	+1.2
1,929,481	-	diaA	NOLOHH_10020	0.63	-0.4
1,929,705	-				+1.0
1,929,711	+				-1.7
1,929,712	-				-0.6
1,929,718	+				-3.4
1,929,719	-				+0.5
1,929,719	-				+0.6
1,929,722	+				-1.2
1,929,722	+				-0.7
1,929,723	-				+0.6
1,929,747	+				+1.3
1,929,853	+	yraN	NOLOHH_10025	0.33	-2.3
1,929,899	+	yraN	NOLOHH_10025	0.45	+0.3
1,929,959	-	yraN	NOLOHH_10025	0.60	-1.5
1,930,042	+	yraN	NOLOHH_10025	0.81	-2.8
1,930,042	+	yraN	NOLOHH_10025	0.81	-1.5
1,930,043	-	yraN	NOLOHH_10025	0.81	+0.2
1,930,090	-				-1.3
1,930,111	-				-2.3
1,930,111	-				+1.2
1,930,111	-				-0.4
1,930,249	+				-1.5
1,930,250	-				+0.7
1,930,250	-				+0.1
1,930,250	-				-1.7
1,930,250	-				+1.0
1,930,250	-				-2.0
1,930,267	+				+0.4
1,930,274	+				+0.9
1,930,308	+	lpoA	NOLOHH_10030	0.11	+0.3
1,930,308	+	lpoA	NOLOHH_10030	0.11	-0.3
1,930,309	-	lpoA	NOLOHH_10030	0.12	-0.3
1,930,313	+	lpoA	NOLOHH_10030	0.12	-0.4
1,930,342	+	lpoA	NOLOHH_10030	0.13	-0.8
1,930,411	+	lpoA	NOLOHH_10030	0.17	+0.2
1,930,463	+	lpoA	NOLOHH_10030	0.19	-0.6
1,930,463	+	lpoA	NOLOHH_10030	0.19	-0.5
1,930,464	-	lpoA	NOLOHH_10030	0.19	-1.7
1,930,495	+	lpoA	NOLOHH_10030	0.21	-0.1
1,930,495	+	lpoA	NOLOHH_10030	0.21	-1.2
1,930,495	+	lpoA	NOLOHH_10030	0.21	+0.2
1,930,495	+	lpoA	NOLOHH_10030	0.21	+0.1
1,930,495	+	lpoA	NOLOHH_10030	0.21	-1.9
1,930,495	+	lpoA	NOLOHH_10030	0.21	-2.2
1,930,496	-	lpoA	NOLOHH_10030	0.21	-2.6
1,930,496	-	lpoA	NOLOHH_10030	0.21	-0.2
1,930,496	-	lpoA	NOLOHH_10030	0.21	-1.1
1,930,496	-	lpoA	NOLOHH_10030	0.21	+1.1
1,930,496	-	lpoA	NOLOHH_10030	0.21	+0.4
1,930,496	-	lpoA	NOLOHH_10030	0.21	-0.2
1,930,496	-	lpoA	NOLOHH_10030	0.21	-1.6
1,930,520	+	lpoA	NOLOHH_10030	0.22	+0.4
1,930,656	+	lpoA	NOLOHH_10030	0.29	-0.1
1,930,657	-	lpoA	NOLOHH_10030	0.29	+0.5
1,930,657	-	lpoA	NOLOHH_10030	0.29	-0.4