Strain Fitness in Erwinia amylovora T8 around OLJFJH_17960

Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-8
3,769,491	-		OLJFJH_17950	0.87	-1.0
3,769,689	+				+1.0
3,769,770	-				-0.4
3,769,872	-				-0.4
3,769,872	-				-0.6
3,769,887	-				-2.0
3,769,891	+				+0.5
3,769,891	+				+0.5
3,769,891	+				-0.3
3,769,891	+				+0.6
3,769,892	-				+0.4
3,769,892	-				-0.2
3,769,892	-				-0.3
3,770,024	+		OLJFJH_17955	0.24	-0.3
3,770,025	-		OLJFJH_17955	0.24	-0.2
3,770,025	-		OLJFJH_17955	0.24	-0.7
3,770,186	+		OLJFJH_17955	0.83	-0.2
3,770,225	+				-0.6
3,770,416	+				-0.2
3,770,468	+				-0.7
3,770,468	+				-0.3
3,770,497	+				+0.0
3,770,497	+				-0.4
3,770,498	-				-1.2
3,770,498	-				-1.3
3,770,508	+				-2.1
3,770,692	+		OLJFJH_17960	0.11	+0.0
3,770,692	+		OLJFJH_17960	0.11	+0.6
3,770,820	-		OLJFJH_17960	0.16	-0.2
3,770,919	-		OLJFJH_17960	0.20	-1.2
3,771,045	-		OLJFJH_17960	0.26	-2.0
3,771,168	+		OLJFJH_17960	0.31	+0.5
3,771,191	+		OLJFJH_17960	0.32	-0.1
3,771,191	+		OLJFJH_17960	0.32	+0.6
3,771,191	+		OLJFJH_17960	0.32	-1.7
3,771,191	+		OLJFJH_17960	0.32	-0.7
3,771,191	+		OLJFJH_17960	0.32	-0.9
3,771,192	-		OLJFJH_17960	0.32	-0.4
3,771,205	-		OLJFJH_17960	0.32	+0.0
3,771,591	+		OLJFJH_17960	0.49	-2.4
3,771,592	-		OLJFJH_17960	0.49	-0.6
3,771,602	+		OLJFJH_17960	0.49	-1.7
3,771,603	-		OLJFJH_17960	0.49	-1.2
3,771,603	-		OLJFJH_17960	0.49	-0.7
3,771,603	-		OLJFJH_17960	0.49	-1.4
3,771,603	-		OLJFJH_17960	0.49	-1.7
3,771,665	+		OLJFJH_17960	0.52	-0.5
3,771,665	+		OLJFJH_17960	0.52	-2.1
3,771,666	-		OLJFJH_17960	0.52	-1.1
3,771,666	-		OLJFJH_17960	0.52	-2.1
3,771,690	+		OLJFJH_17960	0.53	-1.0
3,771,690	+		OLJFJH_17960	0.53	-0.3
3,771,690	+		OLJFJH_17960	0.53	-1.9
3,771,690	+		OLJFJH_17960	0.53	-0.9
3,771,795	+		OLJFJH_17960	0.58	-0.7
3,771,796	-		OLJFJH_17960	0.58	-1.2
3,772,109	+		OLJFJH_17960	0.71	-2.2
3,772,112	+		OLJFJH_17960	0.71	+0.9
3,772,112	+		OLJFJH_17960	0.71	-2.0
3,772,373	+		OLJFJH_17960	0.82	-1.1
3,772,551	+		OLJFJH_17960	0.90	-0.7
3,772,551	+		OLJFJH_17960	0.90	-2.2
3,772,551	+		OLJFJH_17960	0.90	-2.9
3,772,552	-		OLJFJH_17960	0.90	-3.0
3,772,552	-		OLJFJH_17960	0.90	-1.4
3,772,738	+				-1.2
3,772,795	-				+1.2
3,772,880	-				-0.1
3,773,013	+				+0.0
3,773,013	+				+0.0
3,773,014	-				-0.3
3,773,019	-				-0.3
3,773,024	-				-0.4
3,773,247	-		OLJFJH_17965	0.21	-1.5