Strain Fitness in Erwinia amylovora T8 around OLJFJH_13880

Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-8
2,923,772	-		OLJFJH_13875	0.26	-0.5
2,923,970	+				+0.3
2,924,110	+				-0.0
2,924,154	+				-0.2
2,924,334	+				-0.2
2,924,342	+				+0.2
2,924,590	-		OLJFJH_13880	0.23	-1.3
2,924,593	+		OLJFJH_13880	0.23	-0.5
2,924,594	-		OLJFJH_13880	0.23	-1.2
2,924,642	-		OLJFJH_13880	0.30	-1.8
2,924,856	-		OLJFJH_13880	0.59	-0.9
2,924,895	+		OLJFJH_13880	0.64	-0.3
2,925,139	+				-1.2
2,925,154	-				-0.0
2,925,163	+				-0.5
2,925,163	+				-0.6
2,925,163	+				-1.2
2,925,163	+				-0.4
2,925,164	-				-0.5
2,925,166	-				+1.1
2,925,178	+				-0.0
2,925,179	-				-0.2
2,925,216	-				+0.6
2,925,216	-				+0.0
2,925,216	-				-0.0
2,925,260	+				-1.8
2,925,261	-				+0.1
2,925,296	-				-0.6
2,925,304	+				+0.3
2,925,306	+				-0.4
2,925,307	-				-0.7
2,925,307	-				+1.7
2,925,307	-				+0.1
2,925,307	-				-2.4
2,925,315	+				+0.0
2,925,329	+				-0.0
2,925,365	+				+0.1
2,925,366	-				-2.0
2,925,436	-		OLJFJH_13885	0.13	+0.4
2,925,436	-		OLJFJH_13885	0.13	-0.1
2,925,436	-		OLJFJH_13885	0.13	-0.7
2,925,438	-		OLJFJH_13885	0.13	-1.8
2,925,500	+		OLJFJH_13885	0.28	-0.9
2,925,587	+		OLJFJH_13885	0.49	+0.3
2,925,618	-		OLJFJH_13885	0.57	-1.0
2,925,681	+		OLJFJH_13885	0.72	-0.2
2,925,921	+				-0.7
2,925,921	+				+0.9
2,925,921	+				+0.6
2,925,921	+				+0.8
2,925,922	-				-0.9
2,925,922	-				+0.7
2,925,923	+				+0.2
2,926,082	-		OLJFJH_13890	0.20	+0.3
2,926,116	+		OLJFJH_13890	0.23	+0.4
2,926,116	+		OLJFJH_13890	0.23	+0.3
2,926,121	+		OLJFJH_13890	0.23	+0.7
2,926,121	+		OLJFJH_13890	0.23	+0.5