Strain Fitness in Erwinia amylovora T8 around OLJFJH_11470

Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-8
2,392,958	+		OLJFJH_11465	0.35	+1.3
2,392,959	-		OLJFJH_11465	0.35	-0.2
2,392,959	-		OLJFJH_11465	0.35	-0.7
2,392,959	-		OLJFJH_11465	0.35	-2.6
2,392,959	-		OLJFJH_11465	0.35	-1.0
2,392,959	-		OLJFJH_11465	0.35	-0.4
2,392,959	-		OLJFJH_11465	0.35	-1.4
2,393,048	+		OLJFJH_11465	0.41	-0.0
2,393,378	+		OLJFJH_11465	0.62	-1.0
2,393,379	-		OLJFJH_11465	0.62	-0.3
2,393,416	+		OLJFJH_11465	0.65	-0.1
2,393,416	+		OLJFJH_11465	0.65	-0.8
2,393,416	+		OLJFJH_11465	0.65	+0.4
2,393,421	-		OLJFJH_11465	0.65	-1.4
2,393,421	-		OLJFJH_11465	0.65	-0.4
2,393,421	-		OLJFJH_11465	0.65	-0.2
2,393,421	-		OLJFJH_11465	0.65	-2.6
2,393,421	-		OLJFJH_11465	0.65	+0.9
2,393,516	+		OLJFJH_11465	0.71	+0.1
2,393,516	+		OLJFJH_11465	0.71	-1.0
2,393,517	-		OLJFJH_11465	0.71	-1.0
2,393,517	-		OLJFJH_11465	0.71	+0.6
2,393,517	-		OLJFJH_11465	0.71	-0.4
2,393,692	+		OLJFJH_11465	0.83	-1.7
2,393,692	+		OLJFJH_11465	0.83	-1.4
2,393,692	+		OLJFJH_11465	0.83	-0.3
2,393,693	-		OLJFJH_11465	0.83	-1.5
2,393,695	+		OLJFJH_11465	0.83	-1.5
2,393,733	-		OLJFJH_11465	0.86	-2.0
2,393,760	-		OLJFJH_11465	0.87	-0.9
2,393,938	+				-0.6
2,393,939	-				-1.7
2,393,964	+				-0.9
2,393,965	-				-1.4
2,394,113	+		OLJFJH_11470	0.11	-0.5
2,394,114	-		OLJFJH_11470	0.11	-0.7
2,394,182	+		OLJFJH_11470	0.15	-1.6
2,394,183	-		OLJFJH_11470	0.16	+0.1
2,394,183	-		OLJFJH_11470	0.16	-0.4
2,394,183	-		OLJFJH_11470	0.16	-1.0
2,394,183	-		OLJFJH_11470	0.16	-1.9
2,394,272	+		OLJFJH_11470	0.22	-1.6
2,394,272	+		OLJFJH_11470	0.22	-1.9
2,394,273	-		OLJFJH_11470	0.22	-2.2
2,394,273	-		OLJFJH_11470	0.22	-1.4
2,394,431	+		OLJFJH_11470	0.33	-0.6
2,394,431	+		OLJFJH_11470	0.33	+0.3
2,394,431	+		OLJFJH_11470	0.33	-1.9
2,394,432	-		OLJFJH_11470	0.33	-2.4
2,394,432	-		OLJFJH_11470	0.33	-1.3
2,394,730	+		OLJFJH_11470	0.53	-1.9
2,394,735	-		OLJFJH_11470	0.53	-1.4
2,394,735	-		OLJFJH_11470	0.53	-2.0
2,394,772	-		OLJFJH_11470	0.56	+0.3
2,395,035	-		OLJFJH_11470	0.74	-1.5
2,395,040	+		OLJFJH_11470	0.74	-0.4
2,395,138	+		OLJFJH_11470	0.81	-0.8
2,395,145	+		OLJFJH_11470	0.81	-1.4
2,395,223	+		OLJFJH_11470	0.87	-0.7
2,395,226	+		OLJFJH_11470	0.87	-1.2
2,395,226	+		OLJFJH_11470	0.87	-1.0
2,395,227	-		OLJFJH_11470	0.87	-1.2
2,395,227	-		OLJFJH_11470	0.87	+0.1
2,395,229	+		OLJFJH_11470	0.87	-1.1
2,395,229	+		OLJFJH_11470	0.87	+0.0
2,395,229	+		OLJFJH_11470	0.87	-1.6
2,395,230	-		OLJFJH_11470	0.87	-2.6
2,395,230	-		OLJFJH_11470	0.87	-1.2
2,395,413	-				-0.4
2,395,413	-				+0.0
2,395,427	-				+0.1
2,395,437	-				+0.3
2,395,442	-				+1.8
2,395,485	+				-0.4
2,395,490	+				-0.1
2,395,490	+				+0.2
2,395,519	+				-0.3
2,395,519	+				+0.6
2,395,520	-				+0.0
2,395,525	-				-1.0
2,395,532	-				+0.0
2,395,538	+				+0.1
2,395,563	+				+0.2
2,395,630	+				-0.7
2,395,642	+				+0.5
2,395,702	-				-0.3
2,395,826	+		OLJFJH_11475	0.11	-0.1
2,395,826	+		OLJFJH_11475	0.11	+0.4
2,395,827	-		OLJFJH_11475	0.11	+0.1
2,395,827	-		OLJFJH_11475	0.11	+1.7
2,396,049	+		OLJFJH_11475	0.29	+0.1
2,396,143	+		OLJFJH_11475	0.36	-0.0
2,396,263	+		OLJFJH_11475	0.45	+0.7
2,396,264	-		OLJFJH_11475	0.45	-0.2
2,396,264	-		OLJFJH_11475	0.45	+0.5
2,396,264	-		OLJFJH_11475	0.45	+0.3
2,396,300	+		OLJFJH_11475	0.48	+0.3
2,396,300	+		OLJFJH_11475	0.48	+0.1