Strain Fitness in Erwinia amylovora T8 around OLJFJH_11425

Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-8
2,382,383	+		OLJFJH_11420	0.46	-0.8
2,382,384	-		OLJFJH_11420	0.46	-0.7
2,382,413	+		OLJFJH_11420	0.47	-1.3
2,382,413	+		OLJFJH_11420	0.47	-2.0
2,382,519	-		OLJFJH_11420	0.53	-0.7
2,382,519	-		OLJFJH_11420	0.53	-1.5
2,382,734	+		OLJFJH_11420	0.65	-0.4
2,382,734	+		OLJFJH_11420	0.65	-1.9
2,382,734	+		OLJFJH_11420	0.65	-0.5
2,382,871	+		OLJFJH_11420	0.73	-0.5
2,382,872	-		OLJFJH_11420	0.73	-1.7
2,382,944	+		OLJFJH_11420	0.77	+0.6
2,382,986	-		OLJFJH_11420	0.79	-1.4
2,383,087	+		OLJFJH_11420	0.85	-1.8
2,383,190	+				-1.4
2,383,190	+				-0.6
2,383,191	-				-1.1
2,383,191	-				+0.6
2,383,193	+				-1.0
2,383,193	+				-2.2
2,383,240	+				-0.8
2,383,241	-				-2.0
2,383,311	+				-0.5
2,383,311	+				-0.8
2,383,312	-				-2.0
2,383,312	-				-1.8
2,383,312	-				-1.1
2,383,312	-				+0.3
2,383,314	-				-1.3
2,383,314	-				-0.2
2,383,314	-				-0.7
2,383,322	-				-1.4
2,383,322	-				-1.3
2,383,337	-				-0.8
2,383,359	+				+0.8
2,383,359	+				-1.4
2,383,360	-				-1.7
2,383,360	-				+0.2
2,383,360	-				-1.2
2,383,360	-				-1.0
2,383,360	-				-1.0
2,383,460	-		OLJFJH_11425	0.19	+0.4
2,383,460	-		OLJFJH_11425	0.19	-3.6
2,383,818	+		OLJFJH_11425	0.89	-1.3
2,383,819	-		OLJFJH_11425	0.89	-1.2
2,383,846	-				-0.5
2,383,857	-				-1.7
2,383,965	-				-0.1
2,384,033	-		OLJFJH_11430	0.12	-0.6
2,384,138	+		OLJFJH_11430	0.20	-0.4
2,384,139	-		OLJFJH_11430	0.20	-1.1
2,384,139	-		OLJFJH_11430	0.20	+0.6
2,384,166	+		OLJFJH_11430	0.22	-1.2
2,384,166	+		OLJFJH_11430	0.22	-1.7
2,384,166	+		OLJFJH_11430	0.22	+0.2
2,384,166	+		OLJFJH_11430	0.22	-0.8
2,384,166	+		OLJFJH_11430	0.22	-0.9
2,384,167	-		OLJFJH_11430	0.22	-1.7
2,384,169	-		OLJFJH_11430	0.22	-1.0
2,384,169	-		OLJFJH_11430	0.22	-1.7
2,384,257	-		OLJFJH_11430	0.29	-1.4
2,384,258	+		OLJFJH_11430	0.29	+0.7
2,384,259	-		OLJFJH_11430	0.29	-0.8
2,384,277	+		OLJFJH_11430	0.30	-0.6
2,384,277	+		OLJFJH_11430	0.30	-1.9
2,384,277	+		OLJFJH_11430	0.30	-1.2
2,384,403	+		OLJFJH_11430	0.40	-0.7
2,384,404	-		OLJFJH_11430	0.40	-0.5
2,384,405	+		OLJFJH_11430	0.40	-1.4
2,384,405	+		OLJFJH_11430	0.40	-3.3
2,384,405	+		OLJFJH_11430	0.40	+1.6
2,384,406	-		OLJFJH_11430	0.40	-1.7
2,384,546	-		OLJFJH_11430	0.50	-0.2
2,384,873	+		OLJFJH_11430	0.75	-0.0
2,384,873	+		OLJFJH_11430	0.75	-0.4
2,384,873	+		OLJFJH_11430	0.75	-0.7