Strain Fitness in Erwinia amylovora T8 around OLJFJH_08645

Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-8
1,771,483	-		OLJFJH_08640	0.12	-0.6
1,771,812	+		OLJFJH_08640	0.55	-0.8
1,771,813	-		OLJFJH_08640	0.55	-1.1
1,771,815	-		OLJFJH_08640	0.56	-0.7
1,771,815	-		OLJFJH_08640	0.56	-0.1
1,771,815	-		OLJFJH_08640	0.56	-0.2
1,771,815	-		OLJFJH_08640	0.56	+0.0
1,771,817	-		OLJFJH_08640	0.56	+0.7
1,771,817	-		OLJFJH_08640	0.56	-0.1
1,771,817	-		OLJFJH_08640	0.56	+0.2
1,771,817	-		OLJFJH_08640	0.56	-0.1
1,771,817	-		OLJFJH_08640	0.56	-0.3
1,771,878	-		OLJFJH_08640	0.64	-0.5
1,771,878	-		OLJFJH_08640	0.64	-0.5
1,771,899	+		OLJFJH_08640	0.67	+0.6
1,771,902	+		OLJFJH_08640	0.67	-0.3
1,771,902	+		OLJFJH_08640	0.67	-0.1
1,771,903	-		OLJFJH_08640	0.67	+0.5
1,772,136	+				-0.1
1,772,137	-				-0.2
1,772,137	-				-0.1
1,772,213	-				-0.7
1,772,234	+				-0.3
1,772,235	-				+0.0
1,772,286	+				-0.6
1,772,315	+				+0.1
1,772,315	+				-0.8
1,772,315	+				-0.7
1,772,315	+				-0.9
1,772,315	+				-0.5
1,772,315	+				-0.3
1,772,316	-				-0.9
1,772,316	-				-0.1
1,772,337	+				-1.2
1,772,338	-				-1.1
1,772,372	-				-1.4
1,772,428	+				-1.7
1,772,475	-				-2.4
1,772,549	+				-0.5
1,772,550	-				-0.6
1,772,622	+				-1.2
1,772,622	+				-1.7
1,772,647	+		OLJFJH_08645	0.11	-0.9
1,772,647	+		OLJFJH_08645	0.11	-1.9
1,772,647	+		OLJFJH_08645	0.11	-1.2
1,772,648	-		OLJFJH_08645	0.11	-1.4
1,772,648	-		OLJFJH_08645	0.11	-1.3
1,772,648	-		OLJFJH_08645	0.11	+0.8
1,772,648	-		OLJFJH_08645	0.11	-2.7
1,772,741	-		OLJFJH_08645	0.15	-0.3
1,772,881	+		OLJFJH_08645	0.22	-3.7
1,772,881	+		OLJFJH_08645	0.22	-1.5
1,772,882	-		OLJFJH_08645	0.22	-0.0
1,772,882	-		OLJFJH_08645	0.22	-1.4
1,772,882	-		OLJFJH_08645	0.22	-1.4
1,772,882	-		OLJFJH_08645	0.22	-0.5
1,772,977	+		OLJFJH_08645	0.27	-1.3
1,773,010	-		OLJFJH_08645	0.29	-1.0
1,773,055	+		OLJFJH_08645	0.31	-0.7
1,773,056	-		OLJFJH_08645	0.31	-2.6
1,773,056	-		OLJFJH_08645	0.31	-0.9
1,773,162	+		OLJFJH_08645	0.37	-1.3
1,773,162	+		OLJFJH_08645	0.37	+0.5
1,773,163	-		OLJFJH_08645	0.37	-1.5
1,773,300	+		OLJFJH_08645	0.43	+0.3
1,773,300	+		OLJFJH_08645	0.43	-2.4
1,773,301	-		OLJFJH_08645	0.44	-2.3
1,773,301	-		OLJFJH_08645	0.44	-1.8
1,773,304	+		OLJFJH_08645	0.44	-0.2
1,773,361	-		OLJFJH_08645	0.47	-1.9
1,773,374	-		OLJFJH_08645	0.47	-0.9
1,773,643	+		OLJFJH_08645	0.61	-0.1
1,773,643	+		OLJFJH_08645	0.61	-0.2
1,773,643	+		OLJFJH_08645	0.61	-0.8
1,773,643	+		OLJFJH_08645	0.61	+0.5
1,773,643	+		OLJFJH_08645	0.61	-0.8
1,773,643	+		OLJFJH_08645	0.61	-0.5
1,773,643	+		OLJFJH_08645	0.61	-0.6
1,773,644	-		OLJFJH_08645	0.61	+1.0
1,773,644	-		OLJFJH_08645	0.61	-1.7
1,773,644	-		OLJFJH_08645	0.61	-1.5
1,773,644	-		OLJFJH_08645	0.61	-1.5
1,773,644	-		OLJFJH_08645	0.61	-1.5
1,773,722	-		OLJFJH_08645	0.65	-0.8
1,773,752	-		OLJFJH_08645	0.66	-0.6
1,773,808	+		OLJFJH_08645	0.69	-0.7
1,773,808	+		OLJFJH_08645	0.69	-0.9
1,773,808	+		OLJFJH_08645	0.69	-1.5
1,773,808	+		OLJFJH_08645	0.69	-0.9
1,773,808	+		OLJFJH_08645	0.69	+1.5
1,773,809	-		OLJFJH_08645	0.69	-1.0
1,773,809	-		OLJFJH_08645	0.69	-0.8
1,773,809	-		OLJFJH_08645	0.69	-0.7
1,773,809	-		OLJFJH_08645	0.69	+0.3
1,773,830	+		OLJFJH_08645	0.70	-1.0
1,773,901	-		OLJFJH_08645	0.74	-2.5
1,773,946	+		OLJFJH_08645	0.76	-2.3
1,773,946	+		OLJFJH_08645	0.76	-1.4
1,773,947	-		OLJFJH_08645	0.76	-2.0
1,773,947	-		OLJFJH_08645	0.76	-1.4
1,774,054	+		OLJFJH_08645	0.81	-1.8
1,774,054	+		OLJFJH_08645	0.81	-2.1
1,774,055	-		OLJFJH_08645	0.81	-1.0
1,774,055	-		OLJFJH_08645	0.81	-1.4
1,774,055	-		OLJFJH_08645	0.81	-0.4
1,774,162	-		OLJFJH_08645	0.87	-1.1
1,774,179	+		OLJFJH_08645	0.88	-0.4
1,774,180	-		OLJFJH_08645	0.88	-1.2
1,774,285	+				-0.9
1,774,286	-				-1.0
1,774,297	+				-0.4
1,774,542	+				-0.2
1,774,543	-				+0.0
1,774,548	+				+0.4
1,774,548	+				+0.2
1,774,552	-				-0.8
1,774,605	+				-0.3
1,774,614	-				+0.9
1,774,752	+				-0.2
1,774,753	-				-0.4
1,774,753	-				-1.8
1,774,836	+		OLJFJH_08650	0.14	-0.3
1,774,837	-		OLJFJH_08650	0.14	-0.8
1,774,837	-		OLJFJH_08650	0.14	+0.2
1,774,925	+		OLJFJH_08650	0.23	-0.4
1,775,094	+		OLJFJH_08650	0.39	-0.7
1,775,095	-		OLJFJH_08650	0.39	-0.3
1,775,217	-		OLJFJH_08650	0.50	-0.5
1,775,268	+		OLJFJH_08650	0.55	-1.1
1,775,354	-		OLJFJH_08650	0.64	-0.6