Strain Fitness in Erwinia amylovora T8 around OLJFJH_06225

Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-8
1,256,970	+		OLJFJH_06215	0.61	+0.5
1,256,994	-		OLJFJH_06215	0.63	-0.5
1,257,017	+		OLJFJH_06215	0.64	-0.3
1,257,018	-		OLJFJH_06215	0.64	-0.2
1,257,018	-		OLJFJH_06215	0.64	-1.2
1,257,145	+		OLJFJH_06215	0.72	-0.5
1,257,145	+		OLJFJH_06215	0.72	+0.4
1,257,146	-		OLJFJH_06215	0.72	-0.1
1,257,378	-		OLJFJH_06215	0.86	-0.8
1,257,451	+				-0.4
1,257,451	+				-0.2
1,257,452	-				-0.3
1,257,452	-				+0.0
1,257,484	-				-2.0
1,257,558	+				-0.0
1,257,626	+				+0.1
1,257,626	+				-0.0
1,257,627	-				-0.7
1,257,726	+		OLJFJH_06220	0.47	+0.3
1,257,726	+		OLJFJH_06220	0.47	-0.6
1,257,726	+		OLJFJH_06220	0.47	-0.4
1,257,727	-		OLJFJH_06220	0.48	-1.1
1,257,727	-		OLJFJH_06220	0.48	-1.1
1,257,735	+		OLJFJH_06220	0.51	-0.8
1,257,736	-		OLJFJH_06220	0.51	-1.5
1,257,739	-		OLJFJH_06220	0.52	-3.1
1,257,780	-		OLJFJH_06220	0.68	-2.9
1,257,840	+				+0.7
1,257,840	+				-0.1
1,257,841	-				-3.6
1,257,900	+				-2.0
1,257,900	+				-2.6
1,257,901	-				-3.7
1,257,923	+				-2.6
1,257,924	-				-2.1
1,257,975	+		OLJFJH_06225	0.10	-0.5
1,257,976	-		OLJFJH_06225	0.10	-4.5
1,258,047	+		OLJFJH_06225	0.18	-2.6
1,258,047	+		OLJFJH_06225	0.18	-2.4
1,258,047	+		OLJFJH_06225	0.18	-2.9
1,258,047	+		OLJFJH_06225	0.18	-3.8
1,258,047	+		OLJFJH_06225	0.18	-2.9
1,258,047	+		OLJFJH_06225	0.18	-0.5
1,258,047	+		OLJFJH_06225	0.18	-1.4
1,258,048	-		OLJFJH_06225	0.18	-0.6
1,258,048	-		OLJFJH_06225	0.18	-1.8
1,258,048	-		OLJFJH_06225	0.18	-2.9
1,258,048	-		OLJFJH_06225	0.18	-2.2
1,258,162	+		OLJFJH_06225	0.30	-1.7
1,258,162	+		OLJFJH_06225	0.30	-2.7
1,258,163	-		OLJFJH_06225	0.31	-3.5
1,258,164	+		OLJFJH_06225	0.31	-3.0
1,258,178	+		OLJFJH_06225	0.32	-1.9
1,258,233	+		OLJFJH_06225	0.38	-2.8
1,258,369	+		OLJFJH_06225	0.53	-2.1
1,258,369	+		OLJFJH_06225	0.53	-1.2
1,258,369	+		OLJFJH_06225	0.53	-2.0
1,258,369	+		OLJFJH_06225	0.53	-2.2
1,258,370	-		OLJFJH_06225	0.53	-1.3
1,258,370	-		OLJFJH_06225	0.53	-3.6
1,258,447	+		OLJFJH_06225	0.61	-2.4
1,258,447	+		OLJFJH_06225	0.61	-3.6
1,258,447	+		OLJFJH_06225	0.61	-3.1
1,258,448	-		OLJFJH_06225	0.61	-4.4
1,258,449	+		OLJFJH_06225	0.61	-3.1
1,258,449	+		OLJFJH_06225	0.61	-2.8
1,258,449	+		OLJFJH_06225	0.61	-2.4
1,258,449	+		OLJFJH_06225	0.61	-3.1
1,258,450	-		OLJFJH_06225	0.61	-3.3
1,258,450	-		OLJFJH_06225	0.61	-2.7
1,258,450	-		OLJFJH_06225	0.61	-3.0
1,258,450	-		OLJFJH_06225	0.61	-2.3
1,258,515	+		OLJFJH_06225	0.69	-3.8
1,258,618	+		OLJFJH_06225	0.80	-4.3
1,258,639	-		OLJFJH_06225	0.82	-1.4
1,258,773	+				-2.4
1,258,774	-				-2.5
1,258,774	-				-2.2
1,258,865	+				-2.8
1,258,865	+				-1.6
1,258,865	+				-1.0
1,258,866	-				-0.7
1,258,866	-				-1.3
1,258,866	-				-1.4
1,258,877	+				-2.0
1,258,877	+				-1.5
1,258,877	+				-2.2
1,258,878	-				-1.7
1,258,882	-				-1.7
1,259,001	-				-1.1
1,259,145	+		OLJFJH_06230	0.15	-1.5
1,259,146	-		OLJFJH_06230	0.15	-1.5
1,259,187	+		OLJFJH_06230	0.17	-1.9
1,259,187	+		OLJFJH_06230	0.17	-0.4
1,259,187	+		OLJFJH_06230	0.17	-1.7
1,259,187	+		OLJFJH_06230	0.17	-0.9
1,259,188	-		OLJFJH_06230	0.17	-2.3
1,259,188	-		OLJFJH_06230	0.17	-1.7
1,259,188	-		OLJFJH_06230	0.17	-2.8
1,259,188	-		OLJFJH_06230	0.17	-1.4
1,259,188	-		OLJFJH_06230	0.17	-2.1
1,259,225	+		OLJFJH_06230	0.19	-2.3
1,259,225	+		OLJFJH_06230	0.19	-1.0
1,259,571	-		OLJFJH_06230	0.38	-2.0
1,259,610	+		OLJFJH_06230	0.40	-0.8
1,259,706	-		OLJFJH_06230	0.45	-0.9
1,259,706	-		OLJFJH_06230	0.45	-2.9
1,259,711	+		OLJFJH_06230	0.45	-2.0
1,259,712	-		OLJFJH_06230	0.45	-1.9
1,259,712	-		OLJFJH_06230	0.45	-2.6