Strain Fitness in Erwinia amylovora T8 around OLJFJH_17830

Experiment: Matrix:pear;Phage:cocktail;Temp:17;Samp:6-9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:cocktail;Temp:17;Samp:6-9
3,747,043	-		OLJFJH_17820	0.34	+3.9
3,747,043	-		OLJFJH_17820	0.34	-0.2
3,747,106	+		OLJFJH_17820	0.46	+1.5
3,747,225	+		OLJFJH_17820	0.67	-0.4
3,747,236	+		OLJFJH_17820	0.69	+0.4
3,747,237	-		OLJFJH_17820	0.70	-0.8
3,747,237	-		OLJFJH_17820	0.70	-0.0
3,747,258	+		OLJFJH_17820	0.73	+0.2
3,747,258	+		OLJFJH_17820	0.73	+0.7
3,747,258	+		OLJFJH_17820	0.73	-0.2
3,747,259	-		OLJFJH_17820	0.74	-0.4
3,747,259	-		OLJFJH_17820	0.74	+1.0
3,747,405	-				+0.1
3,747,610	-		OLJFJH_17825	0.12	-1.4
3,747,687	+		OLJFJH_17825	0.33	-0.7
3,747,842	-		OLJFJH_17825	0.74	+2.0
3,747,892	+		OLJFJH_17825	0.88	-0.8
3,747,892	+		OLJFJH_17825	0.88	-0.1
3,747,892	+		OLJFJH_17825	0.88	+0.3
3,748,161	+		OLJFJH_17830	0.29	-0.5
3,748,440	+		OLJFJH_17830	0.81	-0.4
3,748,440	+		OLJFJH_17830	0.81	-0.7
3,748,441	-		OLJFJH_17830	0.81	-1.2
3,748,441	-		OLJFJH_17830	0.81	-2.4
3,748,552	-				-1.6
3,748,592	+				-1.4
3,748,638	+				-1.9
3,748,638	+				-0.8
3,748,639	-				-0.9
3,748,667	+				-0.3
3,748,668	-				-0.3
3,748,668	-				-0.5
3,748,668	-				+0.1
3,748,708	-				-0.9
3,748,708	-				-1.4
3,748,708	-				-0.3
3,748,710	+				+0.3
3,748,722	+				-0.3
3,748,808	+		OLJFJH_17835	0.50	-1.5
3,748,842	+		OLJFJH_17835	0.67	-0.3
3,748,842	+		OLJFJH_17835	0.67	+1.5
3,748,843	-		OLJFJH_17835	0.68	-0.1
3,748,848	+		OLJFJH_17835	0.70	-0.3
3,748,849	-		OLJFJH_17835	0.71	+0.1
3,748,852	+		OLJFJH_17835	0.72	-0.8
3,748,853	-		OLJFJH_17835	0.73	-1.2
3,748,853	-		OLJFJH_17835	0.73	-0.3
3,748,939	-				+0.8
3,748,958	+				-0.6
3,748,958	+				+0.8
3,748,958	+				-1.1
3,748,958	-				-0.1
3,748,959	-				-0.1
3,748,959	-				-0.5
3,748,959	-				-0.0
3,748,978	+				+1.7
3,748,978	+				-0.3
3,748,979	-				+0.6
3,748,979	-				+3.1
3,749,029	+		OLJFJH_17840	0.33	-1.6
3,749,035	-		OLJFJH_17840	0.37	+1.4
3,749,035	-		OLJFJH_17840	0.37	-0.5
3,749,084	-		OLJFJH_17840	0.70	-0.8
3,749,088	+		OLJFJH_17840	0.73	-0.8
3,749,088	+		OLJFJH_17840	0.73	+0.7
3,749,089	-		OLJFJH_17840	0.73	+1.8
3,749,089	-		OLJFJH_17840	0.73	-1.0
3,749,089	-		OLJFJH_17840	0.73	+1.4
3,749,089	-		OLJFJH_17840	0.73	-0.8
3,749,164	+				-0.4
3,749,164	+				+0.2
3,749,165	-				-0.9
3,749,181	+				+0.2
3,749,181	+				-0.1
3,749,181	+				-0.6
3,749,181	+				+1.9
3,749,234	+		OLJFJH_17845	0.15	-1.0
3,749,238	+		OLJFJH_17845	0.16	-0.4
3,749,266	+		OLJFJH_17845	0.20	+1.2
3,749,267	-		OLJFJH_17845	0.21	-1.3
3,749,330	+		OLJFJH_17845	0.30	-0.6
3,749,331	-		OLJFJH_17845	0.31	-1.3
3,749,352	+		OLJFJH_17845	0.34	-2.0
3,749,375	-		OLJFJH_17845	0.37	+2.3
3,749,434	+		OLJFJH_17845	0.47	-0.2
3,749,435	-		OLJFJH_17845	0.47	+2.6
3,749,491	+		OLJFJH_17845	0.56	+1.0
3,749,491	+		OLJFJH_17845	0.56	-0.2
3,749,492	-		OLJFJH_17845	0.56	-0.7
3,749,492	-		OLJFJH_17845	0.56	-1.0
3,749,492	-		OLJFJH_17845	0.56	-1.0
3,749,492	-		OLJFJH_17845	0.56	-0.4
3,749,492	-		OLJFJH_17845	0.56	-1.8