Strain Fitness in Erwinia amylovora T8 around OLJFJH_15840

Experiment: Matrix:pear;Phage:cocktail;Temp:17;Samp:6-9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:cocktail;Temp:17;Samp:6-9
3,335,770	-		OLJFJH_15835	0.35	-0.2
3,335,770	-		OLJFJH_15835	0.35	-0.4
3,335,830	-		OLJFJH_15835	0.41	+1.0
3,335,998	-		OLJFJH_15835	0.60	+0.0
3,335,998	-		OLJFJH_15835	0.60	+0.8
3,336,042	-		OLJFJH_15835	0.64	+1.1
3,336,054	+		OLJFJH_15835	0.66	-1.0
3,336,078	+		OLJFJH_15835	0.68	-0.6
3,336,079	-		OLJFJH_15835	0.68	-0.2
3,336,079	-		OLJFJH_15835	0.68	-0.6
3,336,092	+		OLJFJH_15835	0.70	+0.9
3,336,134	-		OLJFJH_15835	0.74	-0.1
3,336,138	+		OLJFJH_15835	0.75	-0.2
3,336,258	+		OLJFJH_15835	0.88	+0.0
3,336,259	-		OLJFJH_15835	0.88	+0.4
3,336,300	+				-0.6
3,336,310	+				+0.1
3,336,342	+				-0.9
3,336,342	+				+1.5
3,336,342	+				-0.7
3,336,361	+				-1.9
3,336,587	+				-3.1
3,336,588	-				+2.0
3,336,696	+				+1.6
3,336,697	-				-0.4
3,336,697	-				+0.6
3,336,699	-				-0.0
3,336,804	+		OLJFJH_15840	0.24	-0.3
3,336,805	-		OLJFJH_15840	0.25	-0.8
3,336,844	-		OLJFJH_15840	0.42	-1.3
3,336,844	-		OLJFJH_15840	0.42	-0.0
3,336,847	+		OLJFJH_15840	0.43	+0.2
3,336,847	+		OLJFJH_15840	0.43	-0.8
3,336,848	-		OLJFJH_15840	0.43	-0.8
3,337,067	-				+2.4
3,337,128	-				+0.2
3,337,158	-				+3.9
3,337,160	+				+1.0
3,337,160	+				+0.1
3,337,160	+				-0.1
3,337,160	+				+0.6
3,337,160	+				-0.8
3,337,160	+				+0.2
3,337,160	+				+0.3
3,337,161	-				+0.1
3,337,161	-				+0.7
3,337,166	-				-1.3
3,337,166	-				-0.6
3,337,233	+				+0.1
3,337,233	+				-0.7
3,337,234	-				-0.0
3,337,234	-				-0.1
3,337,304	-		OLJFJH_15845	0.13	-0.3
3,337,407	+		OLJFJH_15845	0.20	-1.2
3,337,410	+		OLJFJH_15845	0.21	-0.8
3,337,411	-		OLJFJH_15845	0.21	+0.4
3,337,411	-		OLJFJH_15845	0.21	-0.6
3,337,763	+		OLJFJH_15845	0.46	+4.5
3,337,764	-		OLJFJH_15845	0.46	+1.8
3,337,791	+		OLJFJH_15845	0.48	+0.3
3,337,791	+		OLJFJH_15845	0.48	-0.2
3,337,792	-		OLJFJH_15845	0.48	-0.7
3,337,917	-		OLJFJH_15845	0.57	+0.4
3,337,925	+		OLJFJH_15845	0.58	-0.6