Strain Fitness in Erwinia amylovora T8 around OLJFJH_13430

Experiment: Matrix:pear;Phage:cocktail;Temp:17;Samp:6-9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:cocktail;Temp:17;Samp:6-9
2,827,280	+		OLJFJH_13420	0.54	-0.2
2,827,281	-		OLJFJH_13420	0.54	-0.1
2,827,391	+		OLJFJH_13420	0.65	+0.6
2,827,421	+		OLJFJH_13420	0.68	-1.6
2,827,421	+		OLJFJH_13420	0.68	+0.7
2,827,421	+		OLJFJH_13420	0.68	+0.4
2,827,421	+		OLJFJH_13420	0.68	+0.4
2,827,422	-		OLJFJH_13420	0.69	-1.1
2,827,422	-		OLJFJH_13420	0.69	-0.1
2,827,446	+		OLJFJH_13420	0.71	-0.5
2,827,446	+		OLJFJH_13420	0.71	+0.0
2,827,446	+		OLJFJH_13420	0.71	+1.7
2,827,447	-		OLJFJH_13420	0.71	+0.5
2,827,447	-		OLJFJH_13420	0.71	-0.8
2,827,447	-		OLJFJH_13420	0.71	-0.5
2,827,447	-		OLJFJH_13420	0.71	-0.2
2,827,447	-		OLJFJH_13420	0.71	+0.5
2,827,447	-		OLJFJH_13420	0.71	-0.1
2,827,476	+		OLJFJH_13420	0.74	+0.3
2,827,476	+		OLJFJH_13420	0.74	-0.2
2,827,477	-		OLJFJH_13420	0.74	-1.3
2,827,477	-		OLJFJH_13420	0.74	-0.8
2,827,509	+		OLJFJH_13420	0.77	+0.0
2,827,876	-				-0.8
2,827,951	+		OLJFJH_13425	0.32	-0.3
2,828,120	+		OLJFJH_13425	0.85	-0.2
2,828,120	+		OLJFJH_13425	0.85	-0.8
2,828,121	-		OLJFJH_13425	0.85	+0.8
2,828,169	+				-0.2
2,828,170	-				-1.2
2,828,172	+				+2.8
2,828,172	+				-0.7
2,828,172	+				-0.0
2,828,172	+				-0.4
2,828,172	+				+0.7
2,828,173	-				-2.8
2,828,173	-				-0.2
2,828,173	-				+0.1
2,828,173	-				+0.9
2,828,173	-				-0.1
2,828,182	-				-0.6
2,828,217	+				-0.6
2,828,319	+				+0.6
2,828,320	-				-0.7
2,828,436	-		OLJFJH_13430	0.15	-1.0
2,828,462	-		OLJFJH_13430	0.17	-3.6
2,828,462	-		OLJFJH_13430	0.17	+0.3
2,828,490	+		OLJFJH_13430	0.19	-2.3
2,828,491	-		OLJFJH_13430	0.19	+0.9
2,828,491	-		OLJFJH_13430	0.19	-1.8
2,828,497	+		OLJFJH_13430	0.19	-1.6
2,828,578	+		OLJFJH_13430	0.25	-0.7
2,828,579	-		OLJFJH_13430	0.25	+1.3
2,828,617	+		OLJFJH_13430	0.27	-0.4
2,828,650	-		OLJFJH_13430	0.30	+0.3
2,828,716	+		OLJFJH_13430	0.34	-0.1
2,828,815	+		OLJFJH_13430	0.41	-1.6
2,828,816	-		OLJFJH_13430	0.41	-2.5
2,828,816	-		OLJFJH_13430	0.41	+0.5
2,828,850	+		OLJFJH_13430	0.43	-1.0
2,828,855	-		OLJFJH_13430	0.44	-1.1
2,828,938	-		OLJFJH_13430	0.49	-0.1
2,828,968	+		OLJFJH_13430	0.51	+1.5
2,828,970	+		OLJFJH_13430	0.52	-1.2
2,828,970	+		OLJFJH_13430	0.52	-1.9
2,828,977	+		OLJFJH_13430	0.52	-1.8
2,828,978	-		OLJFJH_13430	0.52	-2.2
2,828,979	+		OLJFJH_13430	0.52	-0.4
2,828,979	+		OLJFJH_13430	0.52	-1.0
2,828,979	+		OLJFJH_13430	0.52	-0.0
2,828,979	+		OLJFJH_13430	0.52	-0.9
2,828,979	+		OLJFJH_13430	0.52	-2.0
2,828,979	+		OLJFJH_13430	0.52	+2.8
2,828,980	-		OLJFJH_13430	0.52	-0.9
2,828,980	-		OLJFJH_13430	0.52	-1.4
2,828,980	-		OLJFJH_13430	0.52	+0.2
2,828,980	-		OLJFJH_13430	0.52	-0.3
2,829,075	-		OLJFJH_13430	0.59	+0.8
2,829,406	+		OLJFJH_13430	0.81	-0.4
2,829,513	+		OLJFJH_13430	0.89	+0.9
2,829,514	-		OLJFJH_13430	0.89	-1.5
2,829,543	+				-0.5
2,829,543	+				-0.5
2,829,543	+				-1.5
2,829,544	-				+3.0
2,829,548	-				-0.2
2,829,548	-				+0.3
2,829,716	+				-1.0
2,829,717	-				-0.0
2,829,948	+				+0.7
2,829,948	+				-0.6
2,829,972	-				+0.1
2,830,082	-				-0.3
2,830,108	-		OLJFJH_13435	0.14	+0.5
2,830,125	+		OLJFJH_13435	0.20	-0.5
2,830,125	+		OLJFJH_13435	0.20	-1.3
2,830,275	-		OLJFJH_13435	0.70	-1.9
2,830,275	-		OLJFJH_13435	0.70	+6.5
2,830,280	+		OLJFJH_13435	0.72	-0.5
2,830,348	-				+0.0
2,830,348	-				+1.4
2,830,356	+				-0.5
2,830,356	+				+0.1
2,830,357	-				-0.7
2,830,357	-				-1.2
2,830,357	-				-2.0
2,830,357	-				-1.7
2,830,431	-				-2.4
2,830,437	+				+0.6
2,830,451	+				-0.4
2,830,473	-				+1.7
2,830,566	-				-0.9
2,830,566	-				-0.8
2,830,589	-				-1.3
2,830,589	-				+0.3
2,830,660	-		OLJFJH_13440	0.15	+0.1