Strain Fitness in Erwinia amylovora T8 around OLJFJH_12210

Experiment: Matrix:pear;Phage:cocktail;Temp:17;Samp:6-9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:cocktail;Temp:17;Samp:6-9
2,571,097	+		OLJFJH_12200	0.68	-0.5
2,571,097	+		OLJFJH_12200	0.68	+0.1
2,571,193	-		OLJFJH_12200	0.75	-1.1
2,571,204	+		OLJFJH_12200	0.76	+2.3
2,571,239	+		OLJFJH_12200	0.78	+1.3
2,571,239	+		OLJFJH_12200	0.78	-0.7
2,571,240	-		OLJFJH_12200	0.78	-0.6
2,571,240	-		OLJFJH_12200	0.78	-0.1
2,571,240	-		OLJFJH_12200	0.78	-0.9
2,571,248	-		OLJFJH_12200	0.79	-0.7
2,571,250	-		OLJFJH_12200	0.79	+0.4
2,571,406	-		OLJFJH_12200	0.90	-1.8
2,571,579	-				-0.4
2,571,646	-		OLJFJH_12205	0.18	+3.1
2,571,674	-		OLJFJH_12205	0.35	+0.2
2,571,693	+		OLJFJH_12205	0.47	+1.6
2,571,774	+				-0.0
2,571,774	+				-0.3
2,571,775	-				+0.2
2,571,775	-				-0.4
2,571,779	-				+0.4
2,571,779	-				+0.4
2,571,829	-				-0.9
2,571,829	-				-0.3
2,571,871	+				+0.1
2,571,871	+				+0.5
2,571,872	-				+0.4
2,571,872	-				-0.8
2,571,872	-				-0.3
2,571,880	-				-1.9
2,571,970	+				+0.0
2,572,072	+				+0.0
2,572,073	-				+0.2
2,572,086	+				-0.6
2,572,087	-				-0.2
2,572,173	-		OLJFJH_12210	0.15	-0.5
2,572,447	+		OLJFJH_12210	0.38	-0.2
2,572,481	+		OLJFJH_12210	0.41	-1.1
2,572,541	-		OLJFJH_12210	0.46	-1.3
2,573,104	-				-0.6
2,573,112	-				+0.6
2,573,164	+				-0.7
2,573,165	-				+4.6
2,573,207	+				-1.1
2,573,207	+				-0.1
2,573,208	-				+0.5
2,573,208	-				-0.5
2,573,238	-				-0.1
2,573,308	-				-1.9
2,573,513	+		OLJFJH_12215	0.54	-0.5
2,573,583	+		OLJFJH_12215	0.75	-0.4
2,573,583	+		OLJFJH_12215	0.75	-2.3
2,573,583	+		OLJFJH_12215	0.75	+1.1
2,573,584	-		OLJFJH_12215	0.75	+0.9
2,573,584	-		OLJFJH_12215	0.75	-0.2
2,573,584	-		OLJFJH_12215	0.75	-0.6
2,573,584	-		OLJFJH_12215	0.75	+0.9
2,573,630	+		OLJFJH_12215	0.89	-0.0
2,573,683	+				-0.7
2,573,783	+				+1.9
2,573,783	+				-0.6
2,573,785	+				+0.7
2,573,786	-				+1.0
2,573,804	-				+0.5
2,574,130	+		OLJFJH_12220	0.15	+0.4
2,574,131	-		OLJFJH_12220	0.15	-0.5
2,574,134	-		OLJFJH_12220	0.15	+1.0