Strain Fitness in Erwinia amylovora T8 around OLJFJH_11015

Experiment: Matrix:pear;Phage:cocktail;Temp:17;Samp:6-9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:cocktail;Temp:17;Samp:6-9
2,296,278	-		OLJFJH_11010	0.70	+0.7
2,296,281	-		OLJFJH_11010	0.71	-0.2
2,296,281	-		OLJFJH_11010	0.71	+0.8
2,296,315	-		OLJFJH_11010	0.74	-0.7
2,296,415	+		OLJFJH_11010	0.86	+0.1
2,296,417	+		OLJFJH_11010	0.86	+0.6
2,296,417	+		OLJFJH_11010	0.86	+0.6
2,296,418	-		OLJFJH_11010	0.86	-0.1
2,296,420	+		OLJFJH_11010	0.86	-0.8
2,296,421	-		OLJFJH_11010	0.86	+1.2
2,296,421	-		OLJFJH_11010	0.86	-0.1
2,296,529	+				-1.1
2,296,590	-				+1.1
2,296,716	-				-0.3
2,296,716	-				-0.3
2,296,776	+				+0.9
2,296,858	+				-0.9
2,296,891	+				+0.8
2,296,891	+				+0.6
2,297,063	+				-1.4
2,297,063	+				-0.1
2,297,064	-				-1.7
2,297,064	-				+0.1
2,297,065	+				-0.7
2,297,065	+				+0.1
2,297,065	+				-0.0
2,297,192	+				-0.1
2,297,213	-				-0.9
2,297,213	-				-0.8
2,297,220	-				+1.4
2,297,261	+				-0.5
2,297,261	+				+2.5
2,297,262	-				+0.2
2,297,289	+		OLJFJH_11015	0.18	-0.6
2,297,346	+		OLJFJH_11015	0.45	-0.3
2,297,346	+		OLJFJH_11015	0.45	-0.4
2,297,417	-		OLJFJH_11015	0.79	-1.3
2,297,417	-		OLJFJH_11015	0.79	-0.9
2,297,417	-		OLJFJH_11015	0.79	-0.2
2,297,451	+				-0.9
2,297,555	-				-0.9
2,297,642	-				-0.7
2,297,707	-				-0.3
2,297,731	-				-0.2
2,297,847	+		OLJFJH_11020	0.16	+0.7
2,297,848	-		OLJFJH_11020	0.16	+1.8
2,297,940	+		OLJFJH_11020	0.23	-1.2
2,297,940	+		OLJFJH_11020	0.23	-0.1
2,298,072	-		OLJFJH_11020	0.34	-1.2
2,298,111	+		OLJFJH_11020	0.37	+0.5
2,298,112	-		OLJFJH_11020	0.37	+0.6
2,298,112	-		OLJFJH_11020	0.37	+0.4
2,298,112	-		OLJFJH_11020	0.37	+0.3
2,298,249	+		OLJFJH_11020	0.48	-0.5
2,298,249	+		OLJFJH_11020	0.48	-0.6
2,298,250	-		OLJFJH_11020	0.48	+2.1
2,298,250	-		OLJFJH_11020	0.48	-0.6
2,298,250	-		OLJFJH_11020	0.48	-1.1
2,298,373	+		OLJFJH_11020	0.58	+0.6
2,298,373	+		OLJFJH_11020	0.58	-0.9
2,298,374	-		OLJFJH_11020	0.58	+1.7
2,298,374	-		OLJFJH_11020	0.58	+0.6
2,298,374	-		OLJFJH_11020	0.58	-0.0
2,298,448	-		OLJFJH_11020	0.64	+0.5