Strain Fitness in Erwinia amylovora T8 around OLJFJH_07140
Experiment: Matrix:pear;Phage:cocktail;Temp:17;Samp:6-9
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Matrix:pear;Phage:cocktail;Temp:17;Samp:6-9 |
|---|---|---|---|---|---|
| remove | |||||
| 1,455,305 | - | -0.4 | |||
| 1,455,415 | + | OLJFJH_07140 | 0.28 | -0.4 | |
| 1,455,416 | - | OLJFJH_07140 | 0.29 | -1.1 | |
| 1,455,416 | - | OLJFJH_07140 | 0.29 | +0.8 | |
| 1,455,416 | - | OLJFJH_07140 | 0.29 | -1.9 | |
| 1,455,416 | - | OLJFJH_07140 | 0.29 | -1.0 | |
| 1,455,477 | - | OLJFJH_07140 | 0.52 | -1.1 | |
| 1,455,477 | - | OLJFJH_07140 | 0.52 | -0.9 | |
| 1,455,551 | + | OLJFJH_07140 | 0.80 | -0.6 | |
| 1,455,552 | - | OLJFJH_07140 | 0.81 | -0.3 | |
| 1,455,641 | + | -1.4 | |||
| 1,455,646 | + | +0.3 | |||
| 1,455,657 | - | -0.6 |
Or see this region's nucleotide sequence