Experiment: Matrix:pear;Phage:cocktail;Temp:17;Samp:6-9
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_04150 and OLJFJH_04155 are separated by 45 nucleotides OLJFJH_04155 and OLJFJH_04160 overlap by 4 nucleotides
OLJFJH_04150: OLJFJH_04150 - phosphoenolpyruvate carboxykinase (ATP), at 790,490 to 792,109
_04150
OLJFJH_04155: OLJFJH_04155 - two-component system sensor histidine kinase EnvZ, at 792,155 to 793,504
_04155
OLJFJH_04160: OLJFJH_04160 - two-component system response regulator OmpR, at 793,501 to 794,352
_04160
Position (kb) 792
793
794 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 791.176 kb on + strand, within OLJFJH_04150 at 791.176 kb on + strand, within OLJFJH_04150 at 791.177 kb on - strand, within OLJFJH_04150 at 791.246 kb on - strand, within OLJFJH_04150 at 791.387 kb on + strand, within OLJFJH_04150 at 791.387 kb on + strand, within OLJFJH_04150 at 791.430 kb on + strand, within OLJFJH_04150 at 791.430 kb on + strand, within OLJFJH_04150 at 791.434 kb on + strand, within OLJFJH_04150 at 791.435 kb on - strand, within OLJFJH_04150 at 791.507 kb on - strand, within OLJFJH_04150 at 791.513 kb on - strand, within OLJFJH_04150 at 791.627 kb on + strand, within OLJFJH_04150 at 791.771 kb on - strand, within OLJFJH_04150 at 791.833 kb on + strand, within OLJFJH_04150 at 791.834 kb on - strand, within OLJFJH_04150 at 791.860 kb on + strand, within OLJFJH_04150 at 791.860 kb on + strand, within OLJFJH_04150 at 791.860 kb on + strand, within OLJFJH_04150 at 791.860 kb on + strand, within OLJFJH_04150 at 791.861 kb on - strand, within OLJFJH_04150 at 791.875 kb on + strand, within OLJFJH_04150 at 791.952 kb on + strand at 792.114 kb on + strand at 792.115 kb on - strand at 792.156 kb on + strand at 792.156 kb on + strand at 792.202 kb on - strand at 792.239 kb on + strand at 792.240 kb on - strand at 792.278 kb on + strand at 792.279 kb on - strand at 792.279 kb on - strand at 792.279 kb on - strand at 792.356 kb on + strand, within OLJFJH_04155 at 792.374 kb on - strand, within OLJFJH_04155 at 792.882 kb on + strand, within OLJFJH_04155 at 793.237 kb on + strand, within OLJFJH_04155 at 793.238 kb on - strand, within OLJFJH_04155 at 793.238 kb on - strand, within OLJFJH_04155 at 793.238 kb on - strand, within OLJFJH_04155 at 793.239 kb on + strand, within OLJFJH_04155 at 793.240 kb on - strand, within OLJFJH_04155 at 793.254 kb on - strand, within OLJFJH_04155 at 793.263 kb on + strand, within OLJFJH_04155 at 793.462 kb on + strand at 793.463 kb on - strand at 793.477 kb on + strand at 793.557 kb on + strand at 793.559 kb on + strand at 793.641 kb on - strand, within OLJFJH_04160 at 793.702 kb on + strand, within OLJFJH_04160 at 793.797 kb on + strand, within OLJFJH_04160 at 793.797 kb on + strand, within OLJFJH_04160 at 793.916 kb on + strand, within OLJFJH_04160 at 793.916 kb on + strand, within OLJFJH_04160 at 793.916 kb on + strand, within OLJFJH_04160 at 793.917 kb on - strand, within OLJFJH_04160 at 793.917 kb on - strand, within OLJFJH_04160 at 793.917 kb on - strand, within OLJFJH_04160 at 793.980 kb on + strand, within OLJFJH_04160 at 794.299 kb on + strand at 794.299 kb on + strand at 794.300 kb on - strand at 794.300 kb on - strand at 794.301 kb on + strand at 794.302 kb on - strand at 794.331 kb on + strand at 794.343 kb on + strand at 794.344 kb on - strand at 794.432 kb on + strand at 794.432 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:cocktail;Temp:17;Samp:6-9 remove 791,176 + OLJFJH_04150 0.42 +0.6 791,176 + OLJFJH_04150 0.42 +1.0 791,177 - OLJFJH_04150 0.42 +0.1 791,246 - OLJFJH_04150 0.47 +0.1 791,387 + OLJFJH_04150 0.55 -0.4 791,387 + OLJFJH_04150 0.55 -0.4 791,430 + OLJFJH_04150 0.58 -0.2 791,430 + OLJFJH_04150 0.58 +0.7 791,434 + OLJFJH_04150 0.58 +0.3 791,435 - OLJFJH_04150 0.58 +1.9 791,507 - OLJFJH_04150 0.63 -0.4 791,513 - OLJFJH_04150 0.63 -0.7 791,627 + OLJFJH_04150 0.70 +0.6 791,771 - OLJFJH_04150 0.79 +0.3 791,833 + OLJFJH_04150 0.83 -1.9 791,834 - OLJFJH_04150 0.83 -0.7 791,860 + OLJFJH_04150 0.85 +0.7 791,860 + OLJFJH_04150 0.85 -0.6 791,860 + OLJFJH_04150 0.85 +0.6 791,860 + OLJFJH_04150 0.85 -0.5 791,861 - OLJFJH_04150 0.85 -0.8 791,875 + OLJFJH_04150 0.85 +0.9 791,952 + +0.2 792,114 + +0.8 792,115 - +2.1 792,156 + +1.6 792,156 + +2.1 792,202 - -1.1 792,239 + -1.5 792,240 - -1.3 792,278 + -0.7 792,279 - -0.3 792,279 - -2.3 792,279 - -2.1 792,356 + OLJFJH_04155 0.15 -0.4 792,374 - OLJFJH_04155 0.16 +1.3 792,882 + OLJFJH_04155 0.54 +0.4 793,237 + OLJFJH_04155 0.80 -3.0 793,238 - OLJFJH_04155 0.80 -0.2 793,238 - OLJFJH_04155 0.80 -0.3 793,238 - OLJFJH_04155 0.80 -1.1 793,239 + OLJFJH_04155 0.80 -1.9 793,240 - OLJFJH_04155 0.80 +0.8 793,254 - OLJFJH_04155 0.81 -0.9 793,263 + OLJFJH_04155 0.82 -1.3 793,462 + +0.6 793,463 - -0.5 793,477 + +0.4 793,557 + -0.2 793,559 + -0.4 793,641 - OLJFJH_04160 0.16 -2.0 793,702 + OLJFJH_04160 0.24 -2.4 793,797 + OLJFJH_04160 0.35 -0.2 793,797 + OLJFJH_04160 0.35 -1.3 793,916 + OLJFJH_04160 0.49 -2.1 793,916 + OLJFJH_04160 0.49 +3.0 793,916 + OLJFJH_04160 0.49 -0.9 793,917 - OLJFJH_04160 0.49 -0.2 793,917 - OLJFJH_04160 0.49 -1.8 793,917 - OLJFJH_04160 0.49 -0.0 793,980 + OLJFJH_04160 0.56 +1.9 794,299 + -0.9 794,299 + -0.0 794,300 - -0.9 794,300 - +0.8 794,301 + +2.3 794,302 - -1.3 794,331 + -0.3 794,343 + +1.8 794,344 - -1.0 794,432 + -2.2 794,432 + +0.8
Or see this region's nucleotide sequence