Experiment: Matrix:pear;Phage:cocktail;Temp:17;Samp:6-9
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_03590 and OLJFJH_03595 are separated by 78 nucleotides OLJFJH_03595 and OLJFJH_03600 are separated by 1 nucleotides OLJFJH_03600 and OLJFJH_03605 are separated by 137 nucleotides OLJFJH_03605 and OLJFJH_03610 are separated by 214 nucleotides
OLJFJH_03590: OLJFJH_03590 - glycerol-3-phosphate 1-O-acyltransferase PlsB, at 691,791 to 694,223
_03590
OLJFJH_03595: OLJFJH_03595 - 4-hydroxybenzoate octaprenyltransferase, at 694,302 to 695,165
_03595
OLJFJH_03600: OLJFJH_03600 - chorismate lyase, at 695,167 to 695,691
_03600
OLJFJH_03605: OLJFJH_03605 - phosphate-starvation-inducible protein PsiE, at 695,829 to 696,245
_03605
OLJFJH_03610: OLJFJH_03610 - YjbH domain-containing protein, at 696,460 to 698,553
_03610
Position (kb) 695
696 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 694.266 kb on - strand at 694.266 kb on - strand at 694.266 kb on - strand at 694.266 kb on - strand at 695.169 kb on - strand at 695.195 kb on + strand at 695.196 kb on - strand at 695.293 kb on + strand, within OLJFJH_03600 at 695.294 kb on - strand, within OLJFJH_03600 at 695.294 kb on - strand, within OLJFJH_03600 at 695.294 kb on - strand, within OLJFJH_03600 at 695.369 kb on - strand, within OLJFJH_03600 at 695.490 kb on + strand, within OLJFJH_03600 at 695.490 kb on + strand, within OLJFJH_03600 at 695.751 kb on - strand at 695.878 kb on - strand, within OLJFJH_03605 at 695.878 kb on - strand, within OLJFJH_03605 at 695.881 kb on - strand, within OLJFJH_03605 at 695.900 kb on - strand, within OLJFJH_03605 at 695.900 kb on - strand, within OLJFJH_03605 at 695.978 kb on - strand, within OLJFJH_03605 at 696.049 kb on + strand, within OLJFJH_03605 at 696.049 kb on + strand, within OLJFJH_03605 at 696.050 kb on - strand, within OLJFJH_03605 at 696.050 kb on - strand, within OLJFJH_03605 at 696.077 kb on - strand, within OLJFJH_03605 at 696.126 kb on - strand, within OLJFJH_03605 at 696.126 kb on - strand, within OLJFJH_03605 at 696.165 kb on + strand, within OLJFJH_03605 at 696.166 kb on - strand, within OLJFJH_03605 at 696.166 kb on - strand, within OLJFJH_03605 at 696.184 kb on - strand, within OLJFJH_03605 at 696.184 kb on - strand, within OLJFJH_03605 at 696.225 kb on - strand at 696.248 kb on + strand at 696.291 kb on + strand at 696.297 kb on - strand at 696.297 kb on - strand at 696.297 kb on - strand at 696.360 kb on + strand at 696.369 kb on - strand at 696.369 kb on - strand at 696.392 kb on + strand at 696.394 kb on + strand at 696.394 kb on + strand at 696.394 kb on + strand at 696.395 kb on - strand at 696.395 kb on - strand at 696.426 kb on + strand at 696.427 kb on - strand at 696.492 kb on + strand at 696.492 kb on + strand at 696.493 kb on - strand at 696.497 kb on + strand at 696.497 kb on + strand at 696.498 kb on - strand at 696.506 kb on + strand at 696.510 kb on + strand at 696.510 kb on + strand at 696.511 kb on - strand at 696.677 kb on + strand, within OLJFJH_03610 at 696.678 kb on - strand, within OLJFJH_03610
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:cocktail;Temp:17;Samp:6-9 remove 694,266 - +0.4 694,266 - -0.6 694,266 - -0.0 694,266 - -0.1 695,169 - +0.8 695,195 + +1.3 695,196 - +2.1 695,293 + OLJFJH_03600 0.24 +0.4 695,294 - OLJFJH_03600 0.24 -0.8 695,294 - OLJFJH_03600 0.24 -0.7 695,294 - OLJFJH_03600 0.24 -1.2 695,369 - OLJFJH_03600 0.38 -1.1 695,490 + OLJFJH_03600 0.62 +0.3 695,490 + OLJFJH_03600 0.62 -0.1 695,751 - +0.1 695,878 - OLJFJH_03605 0.12 -1.0 695,878 - OLJFJH_03605 0.12 -5.0 695,881 - OLJFJH_03605 0.12 +0.3 695,900 - OLJFJH_03605 0.17 +0.6 695,900 - OLJFJH_03605 0.17 -0.1 695,978 - OLJFJH_03605 0.36 -0.4 696,049 + OLJFJH_03605 0.53 +2.4 696,049 + OLJFJH_03605 0.53 +0.4 696,050 - OLJFJH_03605 0.53 +0.9 696,050 - OLJFJH_03605 0.53 -0.5 696,077 - OLJFJH_03605 0.59 +0.3 696,126 - OLJFJH_03605 0.71 -1.0 696,126 - OLJFJH_03605 0.71 -0.1 696,165 + OLJFJH_03605 0.81 +0.9 696,166 - OLJFJH_03605 0.81 -0.2 696,166 - OLJFJH_03605 0.81 -0.5 696,184 - OLJFJH_03605 0.85 -0.2 696,184 - OLJFJH_03605 0.85 +0.1 696,225 - +0.9 696,248 + -0.7 696,291 + -0.4 696,297 - -1.6 696,297 - -1.5 696,297 - -0.3 696,360 + +1.9 696,369 - -2.6 696,369 - -0.3 696,392 + +1.0 696,394 + +0.9 696,394 + -1.5 696,394 + -1.0 696,395 - +0.1 696,395 - -0.1 696,426 + -0.3 696,427 - -2.4 696,492 + -0.8 696,492 + +0.8 696,493 - -1.6 696,497 + -1.7 696,497 + +0.5 696,498 - +1.6 696,506 + -0.4 696,510 + -0.9 696,510 + -0.9 696,511 - -0.5 696,677 + OLJFJH_03610 0.10 -0.3 696,678 - OLJFJH_03610 0.10 -0.4
Or see this region's nucleotide sequence