Experiment: Matrix:pear;Phage:cocktail;Temp:17;Samp:6-9
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_03530 and OLJFJH_03535 are separated by 113 nucleotides OLJFJH_03535 and OLJFJH_03540 are separated by 118 nucleotides OLJFJH_03540 and OLJFJH_03545 are separated by 39 nucleotides
OLJFJH_03530: OLJFJH_03530 - hypothetical protein, at 682,522 to 682,917
_03530
OLJFJH_03535: OLJFJH_03535 - hypothetical protein, at 683,031 to 683,342
_03535
OLJFJH_03540: OLJFJH_03540 - antitermination protein Q, at 683,461 to 683,823
_03540
OLJFJH_03545: OLJFJH_03545 - HNH endonuclease, at 683,863 to 684,450
_03545
Position (kb) 683
684 Strain fitness (log2 ratio) -1
0
1
2 at 682.377 kb on + strand at 682.534 kb on - strand at 682.553 kb on + strand at 682.620 kb on + strand, within OLJFJH_03530 at 682.901 kb on + strand at 682.902 kb on - strand at 683.027 kb on + strand at 683.201 kb on + strand, within OLJFJH_03535 at 683.301 kb on - strand, within OLJFJH_03535 at 683.590 kb on - strand, within OLJFJH_03540 at 683.590 kb on - strand, within OLJFJH_03540 at 683.598 kb on + strand, within OLJFJH_03540 at 683.600 kb on + strand, within OLJFJH_03540 at 683.601 kb on - strand, within OLJFJH_03540 at 683.601 kb on - strand, within OLJFJH_03540 at 683.815 kb on - strand at 683.980 kb on - strand, within OLJFJH_03545 at 684.018 kb on + strand, within OLJFJH_03545 at 684.096 kb on + strand, within OLJFJH_03545 at 684.098 kb on + strand, within OLJFJH_03545 at 684.099 kb on - strand, within OLJFJH_03545 at 684.138 kb on + strand, within OLJFJH_03545 at 684.139 kb on - strand, within OLJFJH_03545 at 684.277 kb on + strand, within OLJFJH_03545 at 684.324 kb on + strand, within OLJFJH_03545 at 684.337 kb on - strand, within OLJFJH_03545 at 684.337 kb on - strand, within OLJFJH_03545 at 684.337 kb on - strand, within OLJFJH_03545
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:cocktail;Temp:17;Samp:6-9 remove 682,377 + +0.3 682,534 - +0.0 682,553 + -1.2 682,620 + OLJFJH_03530 0.25 +1.3 682,901 + -1.0 682,902 - -0.1 683,027 + -0.6 683,201 + OLJFJH_03535 0.54 -1.1 683,301 - OLJFJH_03535 0.87 -0.6 683,590 - OLJFJH_03540 0.36 -0.3 683,590 - OLJFJH_03540 0.36 -0.7 683,598 + OLJFJH_03540 0.38 -0.6 683,600 + OLJFJH_03540 0.38 +0.0 683,601 - OLJFJH_03540 0.39 +2.1 683,601 - OLJFJH_03540 0.39 +0.1 683,815 - -0.1 683,980 - OLJFJH_03545 0.20 -0.7 684,018 + OLJFJH_03545 0.26 +0.8 684,096 + OLJFJH_03545 0.40 -1.1 684,098 + OLJFJH_03545 0.40 -1.2 684,099 - OLJFJH_03545 0.40 +0.5 684,138 + OLJFJH_03545 0.47 +2.1 684,139 - OLJFJH_03545 0.47 +0.3 684,277 + OLJFJH_03545 0.70 +0.1 684,324 + OLJFJH_03545 0.78 -0.4 684,337 - OLJFJH_03545 0.81 -0.9 684,337 - OLJFJH_03545 0.81 -0.6 684,337 - OLJFJH_03545 0.81 +2.0
Or see this region's nucleotide sequence