Strain Fitness in Erwinia amylovora T8 around OLJFJH_12150

Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-2
2,558,892	+				+0.2
2,558,893	-				-1.6
2,558,913	+				-1.0
2,558,914	-				-0.2
2,559,584	+		OLJFJH_12145	0.58	-0.3
2,559,585	-		OLJFJH_12145	0.58	-0.7
2,559,682	-		OLJFJH_12145	0.78	+1.7
2,559,842	-				+0.0
2,559,866	+				-0.2
2,559,919	+		OLJFJH_12150	0.13	-2.7
2,560,052	-		OLJFJH_12150	0.35	-2.2
2,560,343	+		OLJFJH_12150	0.82	-3.4
2,560,343	+		OLJFJH_12150	0.82	-1.5
2,560,343	+		OLJFJH_12150	0.82	-2.4
2,560,343	+		OLJFJH_12150	0.82	-2.1
2,560,359	+		OLJFJH_12150	0.85	-2.4
2,560,359	+		OLJFJH_12150	0.85	-1.2
2,560,360	-		OLJFJH_12150	0.85	-2.7
2,560,509	-				-2.3
2,560,509	-				-2.3
2,560,915	+		OLJFJH_12155	0.60	-2.2
2,560,973	-		OLJFJH_12155	0.68	-2.5
2,560,975	+		OLJFJH_12155	0.68	-1.6
2,561,068	+		OLJFJH_12155	0.80	-3.9
2,561,073	+		OLJFJH_12155	0.81	-2.8
2,561,073	+		OLJFJH_12155	0.81	-2.3
2,561,074	-		OLJFJH_12155	0.81	-0.3
2,561,074	-		OLJFJH_12155	0.81	-2.8
2,561,424	+		OLJFJH_12160	0.30	-1.9