Strain Fitness in Erwinia amylovora T8 around OLJFJH_18405

Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8
3,858,641	-				+0.6
3,858,641	-				+1.0
3,858,641	-				+0.9
3,858,687	-				-3.3
3,858,725	+				+1.8
3,858,725	+				-2.4
3,858,726	-				-0.6
3,858,726	-				-1.8
3,858,726	-				-2.3
3,858,726	-				-1.2
3,858,795	+		OLJFJH_18400	0.16	+0.2
3,858,908	+		OLJFJH_18400	0.42	-0.6
3,858,908	+		OLJFJH_18400	0.42	+0.8
3,858,909	-		OLJFJH_18400	0.43	-2.9
3,859,028	+		OLJFJH_18400	0.70	-0.5
3,859,043	+		OLJFJH_18400	0.74	-3.4
3,859,043	+		OLJFJH_18400	0.74	+0.2
3,859,064	+		OLJFJH_18400	0.79	-0.6
3,859,065	-		OLJFJH_18400	0.79	-0.7
3,859,065	-		OLJFJH_18400	0.79	+1.2
3,859,095	-		OLJFJH_18400	0.86	+0.6
3,859,095	-		OLJFJH_18400	0.86	+1.8
3,859,208	+				+0.6
3,859,209	-				-1.6
3,859,291	+				-1.0
3,859,291	+				-0.8
3,859,292	-				+1.8
3,859,344	+				-0.3
3,859,388	-				-1.5
3,859,388	-				-0.3
3,859,388	-				+0.1
3,859,439	-				-0.8
3,859,488	-				-0.3
3,859,492	+				-3.5
3,859,493	-				-3.0
3,859,493	-				+0.2
3,859,493	-				-0.4
3,859,549	+				-2.3
3,859,549	+				-1.0
3,859,549	+				-0.4
3,859,550	-				+2.3
3,859,550	-				-0.1
3,859,551	+				+1.2
3,859,551	+				+2.4
3,859,551	+				+1.6
3,859,552	-				-1.1
3,859,552	-				-3.2
3,859,552	-				-1.3
3,859,555	+				-0.4
3,859,555	+				+2.0
3,859,556	-				+1.2
3,859,759	-		OLJFJH_18405	0.20	-1.0
3,860,068	+		OLJFJH_18405	0.44	+2.1
3,860,082	+		OLJFJH_18405	0.46	+0.6
3,860,082	+		OLJFJH_18405	0.46	-0.6
3,860,083	-		OLJFJH_18405	0.46	+2.6
3,860,083	-		OLJFJH_18405	0.46	-0.5
3,860,311	+		OLJFJH_18405	0.64	+2.4
3,860,312	-		OLJFJH_18405	0.64	+2.0
3,860,410	-		OLJFJH_18405	0.72	-2.4
3,860,685	-				+1.3
3,860,685	-				+0.5
3,860,685	-				-0.2
3,860,775	+				-1.2
3,860,776	-				+0.8
3,860,780	-				-0.1
3,860,788	+				+1.6
3,860,789	-				-1.2
3,860,789	-				-1.0
3,860,828	+				-0.9
3,860,890	-		OLJFJH_18410	0.11	-0.9
3,861,239	-		OLJFJH_18410	0.42	+0.2
3,861,516	-		OLJFJH_18410	0.67	+0.6