Strain Fitness in Erwinia amylovora T8 around OLJFJH_18365

Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8
3,854,237	+		OLJFJH_18360	0.11	+2.7
3,854,237	+		OLJFJH_18360	0.11	-3.8
3,854,237	+		OLJFJH_18360	0.11	+0.6
3,854,237	+		OLJFJH_18360	0.11	+0.6
3,854,237	+		OLJFJH_18360	0.11	-0.5
3,854,238	-		OLJFJH_18360	0.11	-0.1
3,854,238	-		OLJFJH_18360	0.11	-0.2
3,854,242	-		OLJFJH_18360	0.12	-3.8
3,854,242	-		OLJFJH_18360	0.12	-2.1
3,854,242	-		OLJFJH_18360	0.12	-0.2
3,854,242	-		OLJFJH_18360	0.12	-1.1
3,854,242	-		OLJFJH_18360	0.12	+0.7
3,854,274	+		OLJFJH_18360	0.15	+1.7
3,854,278	+		OLJFJH_18360	0.15	-2.9
3,854,295	-		OLJFJH_18360	0.17	+1.3
3,854,328	-		OLJFJH_18360	0.20	-2.5
3,854,328	-		OLJFJH_18360	0.20	-0.2
3,854,392	+		OLJFJH_18360	0.26	+1.2
3,854,392	+		OLJFJH_18360	0.26	+0.3
3,854,393	-		OLJFJH_18360	0.27	-0.5
3,854,394	+		OLJFJH_18360	0.27	-1.4
3,854,397	-		OLJFJH_18360	0.27	+0.1
3,854,411	+		OLJFJH_18360	0.28	+0.8
3,854,412	-		OLJFJH_18360	0.28	+2.4
3,854,417	+		OLJFJH_18360	0.29	-0.7
3,854,451	-		OLJFJH_18360	0.32	-1.0
3,854,471	-		OLJFJH_18360	0.34	-1.7
3,854,471	-		OLJFJH_18360	0.34	+0.4
3,854,477	+		OLJFJH_18360	0.35	+1.4
3,854,481	+		OLJFJH_18360	0.35	-2.6
3,854,481	+		OLJFJH_18360	0.35	+0.6
3,854,483	+		OLJFJH_18360	0.35	-1.8
3,854,484	-		OLJFJH_18360	0.36	+0.6
3,854,499	+		OLJFJH_18360	0.37	+0.2
3,854,523	-		OLJFJH_18360	0.39	-1.0
3,854,561	+		OLJFJH_18360	0.43	+1.0
3,854,595	+		OLJFJH_18360	0.46	+1.1
3,854,596	-		OLJFJH_18360	0.47	-0.4
3,854,597	+		OLJFJH_18360	0.47	+0.2
3,854,598	-		OLJFJH_18360	0.47	-1.0
3,854,622	-		OLJFJH_18360	0.49	-1.6
3,854,658	-		OLJFJH_18360	0.53	-1.2
3,854,658	-		OLJFJH_18360	0.53	-2.6
3,854,667	-		OLJFJH_18360	0.54	-1.1
3,854,691	+		OLJFJH_18360	0.56	+0.9
3,854,691	+		OLJFJH_18360	0.56	-4.2
3,854,693	+		OLJFJH_18360	0.56	+1.9
3,854,720	+		OLJFJH_18360	0.59	-0.1
3,854,759	+		OLJFJH_18360	0.63	-0.5
3,854,978	+		OLJFJH_18360	0.84	+0.3
3,854,978	+		OLJFJH_18360	0.84	-1.4
3,854,986	+		OLJFJH_18360	0.85	+0.2
3,854,998	+		OLJFJH_18360	0.86	-1.2
3,854,999	-		OLJFJH_18360	0.86	+1.4
3,854,999	-		OLJFJH_18360	0.86	+0.1
3,855,030	+		OLJFJH_18360	0.89	-0.2
3,855,030	+		OLJFJH_18360	0.89	-1.3
3,855,030	+		OLJFJH_18360	0.89	-0.7
3,855,030	+		OLJFJH_18360	0.89	-1.0
3,855,031	-		OLJFJH_18360	0.89	+0.7
3,855,034	-		OLJFJH_18360	0.90	+0.5
3,855,072	+				+0.3
3,855,072	+				+0.5
3,855,073	-				-0.4
3,855,123	-				+0.4
3,855,134	-				-0.8
3,855,184	+				-0.1
3,855,248	+		OLJFJH_18365	0.15	+1.1
3,855,325	-		OLJFJH_18365	0.48	+0.7
3,855,345	+		OLJFJH_18365	0.57	+1.3
3,855,345	+		OLJFJH_18365	0.57	-1.1
3,855,392	+		OLJFJH_18365	0.77	+1.9
3,855,392	+		OLJFJH_18365	0.77	-0.9
3,855,476	-				+0.3
3,855,505	+				-0.9
3,855,506	-				+2.8
3,855,509	+				+2.2
3,855,543	+				+0.1
3,855,543	+				+1.6
3,855,543	+				-0.6
3,855,544	-				+0.8
3,855,622	+		OLJFJH_18370	0.18	+0.5
3,855,623	-		OLJFJH_18370	0.18	+0.1
3,855,655	+		OLJFJH_18370	0.23	-3.5
3,855,673	-		OLJFJH_18370	0.26	-1.7
3,855,714	-		OLJFJH_18370	0.33	-0.8
3,855,723	+		OLJFJH_18370	0.35	+0.4
3,855,925	-		OLJFJH_18370	0.69	+2.1
3,856,066	+				+0.1
3,856,066	+				-1.8
3,856,067	-				-2.7
3,856,097	+				-0.9
3,856,097	+				-0.2
3,856,097	+				-0.7
3,856,110	-				-0.7
3,856,110	-				-0.6
3,856,113	-				-0.6
3,856,127	-				-2.9
3,856,134	-				+0.7
3,856,202	-				-0.9
3,856,202	-				-3.1
3,856,317	+				-0.5
3,856,361	-				+0.6
3,856,372	+				+0.4
3,856,375	+				-0.6
3,856,376	-		OLJFJH_18375	0.10	+0.4
3,856,376	-		OLJFJH_18375	0.10	-0.2
3,856,376	-		OLJFJH_18375	0.10	-1.7
3,856,430	+		OLJFJH_18375	0.39	-0.7
3,856,431	-		OLJFJH_18375	0.39	-0.1
3,856,431	-		OLJFJH_18375	0.39	-3.6
3,856,431	-		OLJFJH_18375	0.39	+1.5