Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_17950 and OLJFJH_17955 are separated by 221 nucleotides OLJFJH_17955 and OLJFJH_17960 are separated by 208 nucleotides
OLJFJH_17950: OLJFJH_17950 - peptidylprolyl isomerase, at 3,767,866 to 3,769,737
_17950
OLJFJH_17955: OLJFJH_17955 - DNA-binding protein HU-beta, at 3,769,959 to 3,770,231
_17955
OLJFJH_17960: OLJFJH_17960 - endopeptidase La, at 3,770,440 to 3,772,794
_17960
Position (kb)
3769
3770
3771 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3769.034 kb on + strand, within OLJFJH_17950 at 3769.035 kb on - strand, within OLJFJH_17950 at 3769.035 kb on - strand, within OLJFJH_17950 at 3769.086 kb on - strand, within OLJFJH_17950 at 3769.088 kb on + strand, within OLJFJH_17950 at 3769.088 kb on + strand, within OLJFJH_17950 at 3769.088 kb on + strand, within OLJFJH_17950 at 3769.211 kb on - strand, within OLJFJH_17950 at 3769.243 kb on - strand, within OLJFJH_17950 at 3769.491 kb on - strand, within OLJFJH_17950 at 3769.689 kb on + strand at 3769.770 kb on - strand at 3769.872 kb on - strand at 3769.872 kb on - strand at 3769.887 kb on - strand at 3769.891 kb on + strand at 3769.891 kb on + strand at 3769.891 kb on + strand at 3769.891 kb on + strand at 3769.892 kb on - strand at 3769.892 kb on - strand at 3769.892 kb on - strand at 3770.024 kb on + strand, within OLJFJH_17955 at 3770.025 kb on - strand, within OLJFJH_17955 at 3770.025 kb on - strand, within OLJFJH_17955 at 3770.186 kb on + strand, within OLJFJH_17955 at 3770.225 kb on + strand at 3770.416 kb on + strand at 3770.468 kb on + strand at 3770.468 kb on + strand at 3770.497 kb on + strand at 3770.497 kb on + strand at 3770.498 kb on - strand at 3770.498 kb on - strand at 3770.508 kb on + strand at 3770.692 kb on + strand, within OLJFJH_17960 at 3770.692 kb on + strand, within OLJFJH_17960 at 3770.820 kb on - strand, within OLJFJH_17960 at 3770.919 kb on - strand, within OLJFJH_17960 at 3771.045 kb on - strand, within OLJFJH_17960 at 3771.168 kb on + strand, within OLJFJH_17960 at 3771.191 kb on + strand, within OLJFJH_17960 at 3771.191 kb on + strand, within OLJFJH_17960 at 3771.191 kb on + strand, within OLJFJH_17960 at 3771.191 kb on + strand, within OLJFJH_17960 at 3771.191 kb on + strand, within OLJFJH_17960 at 3771.192 kb on - strand, within OLJFJH_17960 at 3771.205 kb on - strand, within OLJFJH_17960
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8 remove 3,769,034 + OLJFJH_17950 0.62 -1.3 3,769,035 - OLJFJH_17950 0.62 -0.5 3,769,035 - OLJFJH_17950 0.62 +0.0 3,769,086 - OLJFJH_17950 0.65 -0.9 3,769,088 + OLJFJH_17950 0.65 +0.2 3,769,088 + OLJFJH_17950 0.65 -0.1 3,769,088 + OLJFJH_17950 0.65 -0.1 3,769,211 - OLJFJH_17950 0.72 -1.9 3,769,243 - OLJFJH_17950 0.74 -0.5 3,769,491 - OLJFJH_17950 0.87 +0.6 3,769,689 + +1.2 3,769,770 - -1.8 3,769,872 - +1.0 3,769,872 - -2.6 3,769,887 - +3.0 3,769,891 + +2.2 3,769,891 + +1.6 3,769,891 + -2.3 3,769,891 + +0.8 3,769,892 - -1.5 3,769,892 - -1.6 3,769,892 - -2.7 3,770,024 + OLJFJH_17955 0.24 -3.2 3,770,025 - OLJFJH_17955 0.24 -0.7 3,770,025 - OLJFJH_17955 0.24 +1.8 3,770,186 + OLJFJH_17955 0.83 +2.2 3,770,225 + +0.1 3,770,416 + +0.4 3,770,468 + -0.3 3,770,468 + -0.2 3,770,497 + +0.6 3,770,497 + +0.2 3,770,498 - -3.0 3,770,498 - +1.2 3,770,508 + -0.1 3,770,692 + OLJFJH_17960 0.11 +1.6 3,770,692 + OLJFJH_17960 0.11 +0.6 3,770,820 - OLJFJH_17960 0.16 -0.2 3,770,919 - OLJFJH_17960 0.20 +0.4 3,771,045 - OLJFJH_17960 0.26 -0.4 3,771,168 + OLJFJH_17960 0.31 -0.7 3,771,191 + OLJFJH_17960 0.32 -0.5 3,771,191 + OLJFJH_17960 0.32 -0.4 3,771,191 + OLJFJH_17960 0.32 +2.6 3,771,191 + OLJFJH_17960 0.32 +2.5 3,771,191 + OLJFJH_17960 0.32 -1.6 3,771,192 - OLJFJH_17960 0.32 +2.8 3,771,205 - OLJFJH_17960 0.32 +0.6
Or see this region's nucleotide sequence